RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 CRTAMO95727 393 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 KRT14P02533 472 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 APRTP07741 180 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 CKMT1AP12532 417 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 ZNF8P17098 575 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 TPSB2P20231 275 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 GNPDA1P46926 289 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 CDH17Q12864 832 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 ELOCQ15369 112 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 TPSAB1Q15661 275 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 ANKRD22Q5VYY1 191 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 ZDHHC20Q5W0Z9 365 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 ZCCHC8Q6NZY4 707 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 LVRNQ6Q4G3 990 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 GSTA5Q7RTV2 222 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 LINC00523Q86TU6 105 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 ZNF547Q8IVP9 402 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 SLC35F3Q8IY50 421 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 SDR16C5Q8N3Y7 309 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 PNPLA1Q8N8W4 532 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 OR13J1Q8NGT2 312 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 CCDC97Q96F63 343 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 CAPZA3Q96KX2 299 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 ZNF778Q96MU6 729 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 RANBP9Q96S59 729 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 DUSP23Q9BVJ7 150 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 DDX47Q9H0S4 455 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 TRIM39Q9HCM9 518 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 PCYOX1Q9UHG3 505 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 PKP3Q9Y446 797 aa19.31■□□□□ 0.68
SHKBP1-221ENST00000599833 NUAK1O60285 661 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 MTX2O75431 263 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 TMEM63AO94886 807 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 CKMT2P17540 419 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 AK4P27144 223 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 ACTN2P35609 894 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 ARSDP51689 593 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 CTBSQ01459 385 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 OGFOD3Q6PK18 319 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 MARK2Q7KZI7 788 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 RAB44Q7Z6P3 723 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 C11orf96Q7Z7L8 435 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 C17orf82Q86X59 251 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 DDHD1Q8NEL9 900 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 CPT1BQ92523 772 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 SPATS2LQ9NUQ6 558 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 NLE1Q9NVX2 485 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 PRKAB1Q9Y478 270 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 CHD8Q9HCK8 2581 aa19.3■□□□□ 0.68
SHKBP1-221ENST00000599833 TRBV5-4A0A0C4DH59 114 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 SGTAO43765 313 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 NOBOXO60393 691 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 SRP72O76094 671 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 SLC25A14O95258 325 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 PRAMEF1O95521 474 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 ALPPL2P10696 532 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 CTSEP14091 401 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 KCNA4P22459 653 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 IVDP26440 423 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 VPS41P49754 854 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 BASP1P80723 227 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 TMPRSS15P98073 1019 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 PDE1BQ01064 536 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 ACVR1Q04771 509 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 GPS1Q13098 491 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 CCDC38Q502W7 563 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 XKR5Q6UX68 686 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 SYT10Q6XYQ8 523 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 PHYKPLQ8IUZ5 450 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 KYQ8NBH2 561 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 GPR156Q8NFN8 814 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 ADAMTS14Q8WXS8 1223 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 OR2M4Q96R27 311 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 OR2AG1Q9H205 316 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 SLC2A6Q9UGQ3 507 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 MOSPD1Q9UJG1 213 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 RIMKLBQ9ULI2 386 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 PCDHGA1Q9Y5H4 931 aa19.29■□□□□ 0.68
SHKBP1-221ENST00000599833 LAMA5O15230 3695 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 EME2A4GXA9 379 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 CASC3O15234 703 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 EML2O95834 649 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 ANXA6P08133 673 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 PRSS56P0CW18 603 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 CDKN1CP49918 316 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 B4GALNT1Q00973 533 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 NFATC2Q13469 925 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 GPRC6AQ5T6X5 926 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 GUSBP11Q6P575 273 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 CAND1Q86VP6 1230 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 AGGF1Q8N302 714 aaeCLIP19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 ZNF398Q8TD17 642 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 STYXQ8WUJ0 223 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 LRRC45Q96CN5 670 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 CDKN2AIPNLQ96HQ2 116 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 SUDS3Q9H7L9 328 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 RMI1Q9H9A7 625 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 SLC23A2Q9UGH3 650 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 DMXL2Q8TDJ6 3036 aa19.28■□□□□ 0.68
SHKBP1-221ENST00000599833 ZFHX4Q86UP3 3567 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms