RNA–Protein interactions for RNA: ENST00000596304.5

UBA52-208, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, human

APPRIS P1 TSL 5 BASIC

Gene UBA52, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA52-208	ENST00000596304	LYSMD3	Q7Z3D4	306 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	RAVER1	Q8IY67	606 aa	Known RBP	13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	PQLC3	Q8N755	202 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	KCTD6	Q8NC69	237 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	FATE1	Q969F0	183 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	SH3KBP1	Q96B97	665 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	EID2B	Q96D98	161 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	CATSPER2	Q96P56	530 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	ZNF670	Q9BS34	389 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	HERPUD2	Q9BSE4	406 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	MLPH	Q9BV36	600 aa	Predicted RBP	13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	EPN3	Q9H201	632 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	FAM83D	Q9H4H8	585 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	PRDM8	Q9NQV8	689 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	FBXO8	Q9NRD0	319 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	ATXN10	Q9UBB4	475 aa		13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	RPL26L1	Q9UNX3	145 aa	Known RBP	13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	BZW2	Q9Y6E2	419 aa	Known RBP	13.57	□□□□□ -0.24
UBA52-208	ENST00000596304	NBAS	A2RRP1	2371 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304		A0A1W2PQJ5	194 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	ANKRD66	B4E2M5	251 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	GRID2	O43424	1007 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	STK17B	O94768	372 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	DLGAP3	O95886	979 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	SERPING1	P05155	500 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	ZNF8	P17098	575 aa	Predicted RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	MAP4	P27816	1152 aa	Known RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	OAS2	P29728	719 aa	Known RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	PBX1	P40424	430 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	GFER	P55789	205 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	GALNT3	Q14435	633 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	ATP1A1-AS1	Q5TC04	95 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	ALKBH5	Q6P6C2	394 aa	Known RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	CCDC13	Q8IYE1	715 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	CCHCR1	Q8TD31	782 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	CPLX3	Q8WVH0	158 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	SYN2	Q92777	582 aa	Predicted RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	FAF2	Q96CS3	445 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	HDAC11	Q96DB2	347 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	CARD9	Q9H257	536 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	RMI1	Q9H9A7	625 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	DTL	Q9NZJ0	730 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	CPNE7	Q9UBL6	633 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	TUBD1	Q9UJT1	453 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	ADGRG1	Q9Y653	693 aa		13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	MRPS18B	Q9Y676	258 aa	Known RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	MN1	Q10571	1320 aa	Predicted RBP	13.56	□□□□□ -0.24
UBA52-208	ENST00000596304	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	KIR2DS5	A0A0G2JLQ3	304 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304		A0A0G2JNG1	304 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	KIR2DS3	K7RE56	304 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	KCNK1	O00180	336 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	CAPN5	O15484	640 aa	Predicted RBP	13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	PROSC	O94903	275 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	JCHAIN	P01591	159 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	SLC2A4	P14672	509 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	MAN1A1	P33908	653 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	UBE2I	P63279	158 aa	Known RBP	13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	ABHD18	Q0P651	414 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	ZBTB17	Q13105	803 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	KIR2DS5	Q14953	304 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	PDK2	Q15119	407 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	PLA2G4E	Q3MJ16	856 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	ALS2CL	Q60I27	953 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	CRTC3	Q6UUV7	619 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	KDELC2	Q7Z4H8	507 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	CNTD1	Q8N815	330 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	CCNY	Q8ND76	341 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	GPR26	Q8NDV2	337 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	PLEKHG4B	Q96PX9	1271 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	ZPBP	Q9BS86	351 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	SPATA16	Q9BXB7	569 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	OR2AG1	Q9H205	316 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	OSGEPL1	Q9H4B0	414 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	KLC4	Q9NSK0	619 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	HAUS2	Q9NVX0	235 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	SIDT1	Q9NXL6	827 aa	Known RBP	13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	OGFR	Q9NZT2	677 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	NENF	Q9UMX5	172 aa		13.55	□□□□□ -0.24
UBA52-208	ENST00000596304	LILRA5	A6NI73	299 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	OR5K4	A6NMS3	321 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	POLR1C	O15160	346 aa	Predicted RBP	13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	PIRT	P0C851	137 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	ZNF28	P17035	718 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	MX2	P20592	715 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	CLCNKA	P51800	687 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	ZBED6	P86452	979 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	FANCC	Q00597	558 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	DEFB109B	Q30KR1	87 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	ZNF569	Q5MCW4	686 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	CAVIN1	Q6NZI2	390 aa	Known RBP	13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	C16orf46	Q6P387	395 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	ADGRG6	Q86SQ4	1221 aa		13.54	□□□□□ -0.24
UBA52-208	ENST00000596304	PHYKPL	Q8IUZ5	450 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms