RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 NUAK1O60285 661 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 SNX2O60749 519 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 SLC2A4P14672 509 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 DLSTP36957 453 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 GARSP41250 739 aaKnown RBP9.85□□□□□ -0.83
LIG1-209ENST00000596104 PRKCIP41743 596 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 SPINT3P49223 89 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 CLCNKAP51800 687 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 EPHB1P54762 984 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 SLC25A11Q02978 314 aaKnown RBP9.85□□□□□ -0.83
LIG1-209ENST00000596104 GALNT2Q10471 571 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 RNF31Q96EP0 1072 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 ULBP3Q9BZM4 244 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 CARD9Q9H257 536 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 UCK1Q9HA47 277 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 PRDM8Q9NQV8 689 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 LMBRD1Q9NUN5 540 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 AIPL1Q9NZN9 384 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 SCHIP1Q9P0W5 487 aaPredicted RBP9.85□□□□□ -0.83
LIG1-209ENST00000596104 MYO1AQ9UBC5 1043 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 CROTQ9UKG9 612 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 POLHQ9Y253 713 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 SLC30A1Q9Y6M5 507 aa9.85□□□□□ -0.83
LIG1-209ENST00000596104 GOLGA6L3A6NEY3 463 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 GRID2O43424 1007 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 MFSD11O43934 449 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 PDGFAP04085 211 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 KRT7P08729 469 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 MYBL1P10243 752 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 ZNF8P17098 575 aaPredicted RBP9.84□□□□□ -0.83
LIG1-209ENST00000596104 SLC19A1P41440 591 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 MLLT10P55197 1068 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 RPL26P61254 145 aaKnown RBP9.84□□□□□ -0.83
LIG1-209ENST00000596104 SH3BP2P78314 561 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 FOXM1Q08050 763 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 ITKQ08881 620 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 NIPAL4Q0D2K0 466 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 MMRN1Q13201 1228 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 ERV3-1Q14264 604 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 ASIC2Q16515 512 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 C4orf17Q53FE4 359 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 HIST2H2BCQ6DN03 193 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 C6orf15Q6UXA7 325 aaPredicted RBP9.84□□□□□ -0.83
LIG1-209ENST00000596104 TMEM26Q6ZUK4 368 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 ASB18Q6ZVZ8 466 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 TMEM135Q86UB9 458 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 ATCAYQ86WG3 371 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 PHYKPLQ8IUZ5 450 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 CCDC13Q8IYE1 715 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.84□□□□□ -0.83
LIG1-209ENST00000596104 AOPEPQ8N6M6 819 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 NIPA2Q8N8Q9 360 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 TEX19Q8NA77 164 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 AVL9Q8NBF6 648 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 GALNT6Q8NCL4 622 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 LPCAT1Q8NF37 534 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 FAM71BQ8TC56 605 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 FATE1Q969F0 183 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 TRIM11Q96F44 468 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 ISCUQ9H1K1 167 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 FAM83DQ9H4H8 585 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 ZNF768Q9H5H4 540 aaKnown RBP9.84□□□□□ -0.83
LIG1-209ENST00000596104 PCDH9Q9HC56 1237 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 MRPL47Q9HD33 250 aaKnown RBP9.84□□□□□ -0.83
LIG1-209ENST00000596104 ZNF624Q9P2J8 865 aaPredicted RBP9.84□□□□□ -0.83
LIG1-209ENST00000596104 RCOR3Q9P2K3 495 aaPredicted RBP9.84□□□□□ -0.83
LIG1-209ENST00000596104 ATXN10Q9UBB4 475 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 AMACRQ9UHK6 382 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 RPL26L1Q9UNX3 145 aaKnown RBP9.84□□□□□ -0.83
LIG1-209ENST00000596104 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 UNC79Q9P2D8 2635 aa9.84□□□□□ -0.83
LIG1-209ENST00000596104 C1orf232A0A0U1RR37 186 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 RGSL1A5PLK6 1076 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 MATN3O15232 486 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 TOX3O15405 576 aaPredicted RBP9.83□□□□□ -0.84
LIG1-209ENST00000596104 RFPL1O75677 317 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 KIAA0754O94854 1291 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 UBXN7O94888 489 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 NDUFA10O95299 355 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 RECKO95980 971 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 HLA-DQB2P05538 268 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 CD48P09326 243 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 FGF5P12034 268 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 TYRP1P17643 537 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 XRCC1P18887 633 aaPredicted RBP9.83□□□□□ -0.84
LIG1-209ENST00000596104 CDK11BP21127 795 aaKnown RBP9.83□□□□□ -0.84
LIG1-209ENST00000596104 CES1P23141 567 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 NOP2P46087 812 aaKnown RBP9.83□□□□□ -0.84
LIG1-209ENST00000596104 UQCRFS1P47985 274 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 LEPRP48357 1165 aaKnown RBP9.83□□□□□ -0.84
LIG1-209ENST00000596104 SEPHS1P49903 392 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 ZNF165P49910 485 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 ARSEP51690 589 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 PMS2P54278 862 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 PIGHQ14442 188 aaPredicted RBP9.83□□□□□ -0.84
LIG1-209ENST00000596104 IL11RAQ14626 422 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 PAFAH1B3Q15102 231 aaKnown RBP9.83□□□□□ -0.84
LIG1-209ENST00000596104 QPCTQ16769 361 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 ANKRD20A8PQ5CZ79 823 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 ZNF648Q5T619 568 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms