RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ALPPL2P10696 532 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 MLNP12872 115 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 PSMA3P25788 255 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 MGAT1P26572 445 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 C2orf54Q08AI8 447 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 PEX6Q13608 980 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 TUBB2AQ13885 445 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 TCEA2Q15560 299 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 WHAMMP3Q1A5X7 153 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 ZNF648Q5T619 568 aaPredicted RBP14.22□□□□□ -0.13
LIG1-208ENST00000595758 TSTD2Q5T7W7 516 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 RNASEH2BQ5TBB1 312 aaKnown RBP14.22□□□□□ -0.13
LIG1-208ENST00000595758 ZNF572Q7Z3I7 529 aaPredicted RBP14.22□□□□□ -0.13
LIG1-208ENST00000595758 MAATS1Q7Z4T9 603 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 PCGF5Q86SE9 256 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 CAND1Q86VP6 1230 aaKnown RBP14.22□□□□□ -0.13
LIG1-208ENST00000595758 SDR16C5Q8N3Y7 309 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 NAT8LQ8N9F0 302 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 OR4C6Q8NH72 309 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 CDKN2AIPNLQ96HQ2 116 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 CDC6Q99741 560 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 TRIM51Q9BSJ1 452 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 TUBB2BQ9BVA1 445 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 CLPBQ9H078 707 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 TMEM168Q9H0V1 697 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 OR2AG1Q9H205 316 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 ASB8Q9H765 288 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 RMI1Q9H9A7 625 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 XAB2Q9HCS7 855 aaKnown RBP14.22□□□□□ -0.13
LIG1-208ENST00000595758 TRNAU1APQ9NX07 287 aaKnown RBP14.22□□□□□ -0.13
LIG1-208ENST00000595758 NLGN3Q9NZ94 848 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 ATXN10Q9UBB4 475 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 ZNHIT2Q9UHR6 403 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 RIMKLBQ9ULI2 386 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 GPSM3Q9Y4H4 160 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 SLC30A1Q9Y6M5 507 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 SCN8AQ9UQD0 1980 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 H7C0S8 307 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 DNALI1O14645 258 aaPredicted RBP14.21□□□□□ -0.13
LIG1-208ENST00000595758 YY2O15391 372 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 GPR39O43194 453 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 SIGLEC6O43699 453 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 VEGFDO43915 354 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 AVILO75366 819 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 MTX2O75431 263 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 KCNK5O95279 499 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 CELA2BP08218 269 aaPredicted RBP14.21□□□□□ -0.13
LIG1-208ENST00000595758 GIMD1P0DJR0 217 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 CEACAM1P13688 526 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 ZNF8P17098 575 aaPredicted RBP14.21□□□□□ -0.13
LIG1-208ENST00000595758 ITGALP20701 1170 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 IVDP26440 423 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 MC4RP32245 332 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 NOVA1P51513 510 aaKnown RBP14.21□□□□□ -0.13
LIG1-208ENST00000595758 ARSDP51689 593 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 CRADDP78560 199 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 NFATC2Q13469 925 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 DEFB133Q30KQ1 61 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 PYCR3Q53H96 274 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 LDLRAP1Q5SW96 308 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 GPRC6AQ5T6X5 926 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 IZUMO3Q5VZ72 239 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 SNX20Q7Z614 316 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 TAF8Q7Z7C8 310 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 ADGRG6Q86SQ4 1221 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 GKN2Q86XP6 184 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 GALNT13Q8IUC8 556 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 SCG3Q8WXD2 468 aaKnown RBP14.21□□□□□ -0.13
LIG1-208ENST00000595758 PEX13Q92968 403 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 ULK4Q96C45 1275 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 OR2M4Q96R27 311 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 DUSP23Q9BVJ7 150 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 FAM96AQ9H5X1 160 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 CHRAC1Q9NRG0 131 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 SMOXQ9NWM0 555 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 SLC2A6Q9UGQ3 507 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 CRLS1Q9UJA2 301 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 DOLKQ9UPQ8 538 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 PCNX2A6NKB5 2137 aa14.21□□□□□ -0.13
LIG1-208ENST00000595758 CCDC162PA2VCL2 907 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 FAM187AA6NFU0 413 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 SDR42E2A6NKP2 422 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 GPR89AB7ZAQ6 455 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 TPP1O14773 563 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 GIPC1O14908 333 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 NUAK1O60285 661 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 DNAJC6O75061 913 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 CDK14O94921 469 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 LDOC1O95751 146 aaPredicted RBP14.2□□□□□ -0.14
LIG1-208ENST00000595758 GPR89BP0CG08 455 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 KCNA4P22459 653 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 CA5AP35218 305 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 MRPS25P82663 173 aaKnown RBP14.2□□□□□ -0.14
LIG1-208ENST00000595758 TMEM115Q12893 351 aaPredicted RBP14.2□□□□□ -0.14
LIG1-208ENST00000595758 ILF3Q12906 894 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIG1-208ENST00000595758 TRIP6Q15654 476 aaKnown RBP14.2□□□□□ -0.14
LIG1-208ENST00000595758 GPR33Q49SQ1 333 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 KHDC1Q4VXA5 237 aaKnown RBP14.2□□□□□ -0.14
LIG1-208ENST00000595758 ZRANB3Q5FWF4 1079 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 PSAPL1Q6NUJ1 521 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms