RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 SPATA16Q9BXB7 569 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 FSD1LQ9BXM9 530 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 TRABDQ9H4I3 376 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 PRORYQ9H606 182 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 AK5Q9Y6K8 562 aa14.98□□□□□ -0.01
TRIM28-205ENST00000595028 D6RAR5 112 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 KRT86O43790 486 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 DNAJC6O75061 913 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 USP12O75317 370 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 ANXA9O76027 345 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 RPLP0P05388 317 aaKnown RBP14.97□□□□□ -0.01
TRIM28-205ENST00000595028 PTMAP06454 111 aaKnown RBP14.97□□□□□ -0.01
TRIM28-205ENST00000595028 GLB1P16278 677 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 BPIP17213 487 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 PSMB4P28070 264 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 GEMP55040 296 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 MAZP56270 477 aaKnown RBP14.97□□□□□ -0.01
TRIM28-205ENST00000595028 PEX6Q13608 980 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 SLC1A5Q15758 541 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 ANKRD20A2Q5SQ80 823 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 ANKRD20A1Q5TYW2 823 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 ANKRD20A3Q5VUR7 823 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 C17orf82Q86X59 251 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-205ENST00000595028 TTC30BQ8N4P2 665 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 TTC13Q8NBP0 860 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 ZDHHC1Q8WTX9 485 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 GRAMD1AQ96CP6 724 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 PLEKHG4BQ96PX9 1271 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 RMI1Q9H9A7 625 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 HACD3Q9P035 362 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 APPL1Q9UKG1 709 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 GUCA1BQ9UMX6 200 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 PLEKHM1Q9Y4G2 1056 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 PCYT1BQ9Y5K3 369 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-205ENST00000595028 RNF215Q9Y6U7 377 aa14.97□□□□□ -0.01
TRIM28-205ENST00000595028 A0A1W2PQM1 296 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 NUDT21O43809 227 aaKnown RBP14.96□□□□□ -0.01
TRIM28-205ENST00000595028 BRINP1O60477 761 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 PNLIPP16233 465 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 HMGCLP35914 325 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 SPRED1Q7Z699 444 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 PHYKPLQ8IUZ5 450 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 CCNJLQ8IV13 435 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 CCDC110Q8TBZ0 833 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 BLOC1S5Q8TDH9 187 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 GLYATL1Q969I3 302 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 GFM1Q96RP9 751 aaKnown RBP14.96□□□□□ -0.01
TRIM28-205ENST00000595028 FICDQ9BVA6 458 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 CARD9Q9H257 536 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 ENTPD2Q9Y5L3 495 aa14.96□□□□□ -0.01
TRIM28-205ENST00000595028 NUAK1O60285 661 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 ECEL1O95672 775 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 MPOP05164 745 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 CCDC175P0C221 793 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 ADRA1AP35348 466 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 GABREP78334 506 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 CCL7P80098 99 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 GLT6D1Q7Z4J2 308 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 ZNF438Q7Z4V0 828 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 LURAP1LQ8IV03 231 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 NAGSQ8N159 534 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 ARL14Q8N4G2 192 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 SLC35B2Q8TB61 432 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 PATE1Q8WXA2 126 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 ATXN7L3BQ96GX2 97 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 LRRN3Q9H3W5 708 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 POLR1BQ9H9Y6 1135 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 BPIFA1Q9NP55 256 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 ARFGAP3Q9NP61 516 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 LRIT1Q9P2V4 623 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 ATXN10Q9UBB4 475 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 ZNHIT2Q9UHR6 403 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 R3HDM2Q9Y2K5 976 aaKnown RBP14.95□□□□□ -0.02
TRIM28-205ENST00000595028 PRKAB1Q9Y478 270 aa14.95□□□□□ -0.02
TRIM28-205ENST00000595028 PIEZO2Q9H5I5 2752 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 TCRBV7S2A1N4TA0A589 114 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 GPR89AB7ZAQ6 455 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 TLX3O43711 291 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-205ENST00000595028 SLC25A14O95258 325 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-205ENST00000595028 AGTP01019 485 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 GPR89BP0CG08 455 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 SPAM1P38567 509 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 LSSP48449 732 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 CCZ1BP86790 482 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 CCZ1P86791 482 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-205ENST00000595028 PRPSAP1Q14558 356 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 NR1D2Q14995 579 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 TBC1D25Q3MII6 688 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 C3orf38Q5JPI3 329 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 ZNF648Q5T619 568 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-205ENST00000595028 SEL1L2Q5TEA6 688 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 ZDHHC20Q5W0Z9 365 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 LRRC8AQ8IWT6 810 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 KLHDC8BQ8IXV7 354 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 Q8N9G6 341 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-205ENST00000595028 SNIP1Q8TAD8 396 aaKnown RBP14.94□□□□□ -0.02
TRIM28-205ENST00000595028 UBE2Q2Q8WVN8 375 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 PPP1R2P1Q96PQ5 205 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 VPS35Q96QK1 796 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 OR2AG1Q9H205 316 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms