RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 STK10O94804 968 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 MPOP05164 745 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 RPLP0P05388 317 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 ZNF8P17098 575 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 TNNT3P45378 269 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 B4GALNT1Q00973 533 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 MSLNQ13421 630 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 LRP8Q14114 963 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 SPIDRQ14159 915 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 ZNF438Q7Z4V0 828 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 SPRED1Q7Z699 444 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 ADGRG6Q86SQ4 1221 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 CCNJLQ8IV13 435 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 ARL14Q8N4G2 192 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 Q8N9G6 341 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 FAM71DQ8N9W8 422 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 BLOC1S5Q8TDH9 187 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 UBE2Q2Q8WVN8 375 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 GRAMD1AQ96CP6 724 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 ATXN7L3BQ96GX2 97 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 OR2AG1Q9H205 316 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 LRRN3Q9H3W5 708 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 RMI1Q9H9A7 625 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 AAR2Q9Y312 384 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 ZFC3H1O60293 1989 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 CHD6Q8TD26 2715 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 B4GAT1O43505 415 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 BUD23O43709 281 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 TLX3O43711 291 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 EML2O95834 649 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 PTMAP06454 111 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 LSSP48449 732 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 GDF10P55107 478 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 ATP13A5Q4VNC0 1218 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 KHDC1Q4VXA5 237 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 MEI1Q5TIA1 1274 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 DENND5AQ6IQ26 1287 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 CHST15Q7LFX5 561 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 GLT6D1Q7Z4J2 308 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 B3GNT8Q7Z7M8 397 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 DTX3LQ8TDB6 740 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 GFM1Q96RP9 751 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 APOL2Q9BQE5 337 aa18.29■□□□□ 0.52
SHKBP1-202ENST00000593764 D6RAR5 112 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 GAPDHSO14556 408 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 CHUKO15111 745 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 PPM1DO15297 605 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 GRID2O43424 1007 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 ZNF189O75820 626 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 CCDC175P0C221 793 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 CA5AP35218 305 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 PEX6Q13608 980 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 PRPSAP1Q14558 356 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 PTPRCAPQ14761 206 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 NR1D2Q14995 579 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 PRR11Q96HE9 360 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 VPS35Q96QK1 796 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 TMEM121Q9BTD3 319 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 SYNDIG1Q9H7V2 258 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 POLR1BQ9H9Y6 1135 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 LZTFL1Q9NQ48 299 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 TBC1D29Q9UFV1 150 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 ARL5AQ9Y689 179 aa18.28■□□□□ 0.52
SHKBP1-202ENST00000593764 PMS2P1A4D2B8 440 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 GPR89AB7ZAQ6 455 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 MTX2O75431 263 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 DXOO77932 396 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 METTL18O95568 372 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 GPR89BP0CG08 455 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 ACP5P13686 325 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 OR1D5P58170 312 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 GABREP78334 506 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 CHRNA6Q15825 494 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 PARP6Q2NL67 630 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 ZDHHC20Q5W0Z9 365 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 KCTD11Q693B1 232 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 TMPRSS9Q7Z410 1059 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 SLC13A5Q86YT5 568 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 PHYKPLQ8IUZ5 450 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 ATG4AQ8WYN0 398 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 ARNT2Q9HBZ2 717 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 SLC23A2Q9UGH3 650 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 ATXN7L1Q9ULK2 861 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 SATB2Q9UPW6 733 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 KCNK6Q9Y257 313 aa18.27■□□□□ 0.52
SHKBP1-202ENST00000593764 TRBV23OR9-2A0A075B6M9 112 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 A0A087WV48 116 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 A6NCN8 305 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 RHPN2P1A8MT19 583 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 GPR39O43194 453 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 VEGFDO43915 354 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 UGT1A9O60656 530 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 PPFIA2O75334 1257 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 UGT1A6P19224 532 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 UGT1A1P22309 533 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 UGT1A4P22310 534 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 UGT1A3P35503 534 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 UGT1A5P35504 534 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 SPAM1P38567 509 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 ZFP36L1Q07352 338 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms