RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 DPYSL5Q9BPU6 564 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 SPATA16Q9BXB7 569 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 STN1Q9H668 368 aaKnown RBP16.01■□□□□ 0.15
CIRBP-241ENST00000593048 RMI1Q9H9A7 625 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 ZFYVE1Q9HBF4 777 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 DDX56Q9NY93 547 aaKnown RBP16.01■□□□□ 0.15
CIRBP-241ENST00000593048 OAS3Q9Y6K5 1087 aaKnown RBP16.01■□□□□ 0.15
CIRBP-241ENST00000593048 COL6A6A6NMZ7 2263 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 C3orf70A6NLC5 250 aaPredicted RBP16■□□□□ 0.15
CIRBP-241ENST00000593048 SPOPO43791 374 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 DNAJC6O75061 913 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 MTA2O94776 668 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 SLC4A1P02730 911 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 CCL4P13236 92 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 ACP5P13686 325 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 MPSTP25325 297 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 CD82P27701 267 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 CSTF2P33240 577 aaKnown RBP eCLIP16■□□□□ 0.15
CIRBP-241ENST00000593048 SLC1A1P43005 524 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 LIMK2P53671 638 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 ETF1P62495 437 aaKnown RBP16■□□□□ 0.15
CIRBP-241ENST00000593048 GPLD1P80108 840 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 TRA2AQ13595 282 aaKnown RBP eCLIP16■□□□□ 0.15
CIRBP-241ENST00000593048 TUBB2AQ13885 445 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 FAM182AQ5T1J6 154 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 HENMT1Q5T8I9 393 aaKnown RBP16■□□□□ 0.15
CIRBP-241ENST00000593048 LRRC38Q5VT99 294 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 LYSMD3Q7Z3D4 306 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 ZNF761Q86XN6 746 aaPredicted RBP16■□□□□ 0.15
CIRBP-241ENST00000593048 REXO1L1PQ8IX06 675 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 ZSCAN1Q8NBB4 408 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 OR10G6Q8NH81 332 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 SLC37A2Q8TED4 501 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 TTC9Q92623 222 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 WDR24Q96S15 920 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 TUBB2BQ9BVA1 445 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 TSGA10Q9BZW7 698 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 BRD8Q9H0E9 1235 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 FOXJ2Q9P0K8 574 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 CNOT6Q9ULM6 557 aaKnown RBP16■□□□□ 0.15
CIRBP-241ENST00000593048 SHOC2Q9UQ13 582 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 KCNK6Q9Y257 313 aa16■□□□□ 0.15
CIRBP-241ENST00000593048 UNC13CQ8NB66 2214 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 FADS2P1A8MWK0 482 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 C9orf172C9J069 976 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 SNX2O60749 519 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 SLC25A14O95258 325 aaPredicted RBP15.99■□□□□ 0.15
CIRBP-241ENST00000593048 PIRTP0C851 137 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 PLA2G2AP14555 144 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 SLC2A4P14672 509 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 NOP2P46087 812 aaKnown RBP15.99■□□□□ 0.15
CIRBP-241ENST00000593048 FASLGP48023 281 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 HHEXQ03014 270 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 CDK18Q07002 472 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 ALS2CLQ60I27 953 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 TMEM71Q6P5X7 295 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 RAD9BQ6WBX8 426 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 B4GALNT4Q76KP1 1039 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 BZW1Q7L1Q6 419 aaKnown RBP15.99■□□□□ 0.15
CIRBP-241ENST00000593048 SFRP1Q8N474 314 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 AGBL5Q8NDL9 886 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 COL26A1Q96A83 441 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 SGF29Q96ES7 293 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 IMP4Q96G21 291 aaKnown RBP15.99■□□□□ 0.15
CIRBP-241ENST00000593048 TAAR9Q96RI9 348 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 GPR63Q9BZJ6 419 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 SLC25A51Q9H1U9 297 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 RAD18Q9NS91 495 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 HYOU1Q9Y4L1 999 aa15.99■□□□□ 0.15
CIRBP-241ENST00000593048 SOWAHDA6NJG2 315 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 EFSO43281 561 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 GRID2O43424 1007 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 DUX1O43812 170 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 FGF3P11487 239 aaPredicted RBP15.98■□□□□ 0.15
CIRBP-241ENST00000593048 COMTP21964 271 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 TNNT3P45378 269 aaPredicted RBP15.98■□□□□ 0.15
CIRBP-241ENST00000593048 SRSF6Q13247 344 aaKnown RBP15.98■□□□□ 0.15
CIRBP-241ENST00000593048 ATMQ13315 3056 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 NFATC2Q13469 925 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 SQSTM1Q13501 440 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 TFDP2Q14188 446 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 SPA17Q15506 151 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 TEX44Q53QW1 395 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 ZNF569Q5MCW4 686 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 MFSD7Q6UXD7 560 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 SLC9B2Q86UD5 537 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 VASH2Q86V25 355 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 PHYKPLQ8IUZ5 450 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 SH3KBP1Q96B97 665 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 OLFM3Q96PB7 478 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 ARHGAP9Q9BRR9 750 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 HERPUD2Q9BSE4 406 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 ZSCAN5AQ9BUG6 496 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 B3GNT4Q9C0J1 378 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 OR2AG1Q9H205 316 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 CARD9Q9H257 536 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 MAGEE1Q9HCI5 957 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 ARFGAP3Q9NP61 516 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 TBC1D29Q9UFV1 150 aa15.98■□□□□ 0.15
CIRBP-241ENST00000593048 INTUQ9ULD6 942 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms