RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 CEACAM1P13688 526 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 PGAM1P18669 254 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 HMGCLP35914 325 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 SPAM1P38567 509 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 MAGEA4P43358 317 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 ARCN1P48444 511 aaKnown RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 RPS21P63220 83 aaKnown RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 SIM1P81133 766 aaPredicted RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 SARNPP82979 210 aaKnown RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 MPP1Q00013 466 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 SLC14A1Q13336 389 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 STAT4Q14765 748 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 TCEA2Q15560 299 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 UAP1Q16222 522 aaPredicted RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 ATP13A5Q4VNC0 1218 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 ZNF789Q5FWF6 425 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 HENMT1Q5T8I9 393 aaKnown RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 STEAP4Q687X5 459 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 KIAA1161Q6NSJ0 714 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 DOK6Q6PKX4 331 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 CENPUQ71F23 418 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 PTAR1Q7Z6K3 402 aaPredicted RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 SPATS2Q86XZ4 545 aaKnown RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 GATAD2AQ86YP4 633 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 DENND6AQ8IWF6 608 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 NDUFAF2Q8N183 169 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 SKA1Q96BD8 255 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 CDKN2AIPNLQ96HQ2 116 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 LENG8Q96PV6 779 aaPredicted RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 LGR4Q9BXB1 951 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 SLC17A9Q9BYT1 436 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 HACD3Q9P035 362 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 CNOT6Q9ULM6 557 aaKnown RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 PNMA8BQ9ULN7 279 aaPredicted RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 BTBD3Q9Y2F9 522 aa9.58□□□□□ -0.88
DDX39A-220ENST00000593008 OAS3Q9Y6K5 1087 aaKnown RBP9.58□□□□□ -0.88
DDX39A-220ENST00000593008 PLXNB3Q9ULL4 1909 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 GLYATL1P3A0A0U1RQE8 302 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 FAM237BA0A1B0GVD1 139 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 C2orf81A6NN90 581 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 CRTAMO95727 393 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 TOP3BO95985 862 aaKnown RBP9.57□□□□□ -0.88
DDX39A-220ENST00000593008 ZNF30P17039 623 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 SPINK2P20155 84 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 HNRNPA2B1P22626 353 aaKnown RBP9.57□□□□□ -0.88
DDX39A-220ENST00000593008 FOXN2P32314 431 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 POLD2P49005 469 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 CCT8P50990 548 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 SUOXP51687 545 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 PGGT1BP53609 377 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 NXPH1P58417 271 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 CAV1Q03135 178 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 ACVR1Q04771 509 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 FOXC1Q12948 553 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 SGCGQ13326 291 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 PDE1CQ14123 709 aaPredicted RBP9.57□□□□□ -0.88
DDX39A-220ENST00000593008 ZNF423Q2M1K9 1284 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 ZRANB3Q5FWF4 1079 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 RAET1GQ6H3X3 334 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 KIAA0930Q6ICG6 404 aaPredicted RBP9.57□□□□□ -0.88
DDX39A-220ENST00000593008 WDR93Q6P2C0 686 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 NEK5Q6P3R8 708 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 TMEM135Q86UB9 458 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 HEATR4Q86WZ0 1026 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 SLC22A18ASQ8N1D0 253 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 MFSD2AQ8NA29 543 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 TMEM145Q8NBT3 493 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 OR13H1Q8NG92 308 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 OR6P1Q8NGX9 317 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 CENPTQ96BT3 561 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 MRRFQ96E11 262 aaKnown RBP9.57□□□□□ -0.88
DDX39A-220ENST00000593008 BOCQ9BWV1 1114 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 SPATA16Q9BXB7 569 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 FAM83DQ9H4H8 585 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 TRABDQ9H4I3 376 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 MRM3Q9HC36 420 aaKnown RBP9.57□□□□□ -0.88
DDX39A-220ENST00000593008 C20orf96Q9NUD7 363 aaPredicted RBP9.57□□□□□ -0.88
DDX39A-220ENST00000593008 PKD2L2Q9NZM6 624 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 SAMD15Q9P1V8 674 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 MTRF1LQ9UGC7 380 aaKnown RBP9.57□□□□□ -0.88
DDX39A-220ENST00000593008 RAB21Q9UL25 225 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 DMTF1Q9Y222 760 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 PKP3Q9Y446 797 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 PSAT1Q9Y617 370 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 SPEGQ15772 3267 aa9.57□□□□□ -0.88
DDX39A-220ENST00000593008 A0A1B0GTQ1 180 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 TCRBV9S1A1TA0A576 114 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 PSMD11O00231 422 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 OR1I1O60431 355 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 SDC3O75056 442 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 FAM155BO75949 473 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 SRP72O76094 671 aaKnown RBP9.56□□□□□ -0.88
DDX39A-220ENST00000593008 USP1O94782 785 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 ZNF883P0CG24 379 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 THEGLP0DJG4 465 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 PSMA3P25788 255 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 AKT2P31751 481 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 NUDT1P36639 197 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 SLC1A2P43004 574 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 B4GALNT1Q00973 533 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms