RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 TUBA3CQ13748 450 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 NEDD8Q15843 81 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 TBPL2Q6SJ96 375 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 TMEM199Q8N511 208 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 TEX26Q8N6G2 289 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 VPS33AQ96AX1 596 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 CDCA5Q96FF9 252 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 RPL10LQ96L21 214 aaKnown RBP14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 TEX37Q96LM6 180 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 ZNF599Q96NL3 588 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 TDRD1Q9BXT4 1180 aaKnown RBP14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 BRINP2Q9C0B6 783 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 SOX17Q9H6I2 414 aaPredicted RBP14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 LEF1Q9UJU2 399 aaPredicted RBP14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 BOLA2-SMG1P6H3BVE0 249 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 J3KR12 359 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 CD3EAPO15446 510 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 ZBTB11O95625 1053 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 CCNA2P20248 432 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 MATN1P21941 496 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 PGFP49763 221 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 PSEN2P49810 448 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 EMX2Q04743 252 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 PLCL1Q15111 1095 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 RIMKLAQ8IXN7 391 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 SLC35B4Q969S0 331 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 KIAA1191Q96A73 305 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 CHID1Q9BWS9 393 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 NANOGQ9H9S0 305 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 RABL2AQ9UBK7 228 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 GNPTGQ9UJJ9 305 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 NOL3O60936 208 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 KERAO60938 352 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 NPPAP01160 153 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 HRH2P25021 359 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 YAP1P46937 504 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 GRB14Q14449 540 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 CRY1Q16526 586 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 UPP1Q16831 310 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 PDCD4Q53EL6 469 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 MRNIPQ6NTE8 343 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 CHST15Q7LFX5 561 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 SCD5Q86SK9 330 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 SFRP1Q8N474 314 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 ARRDC2Q8TBH0 407 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 TRUB1Q8WWH5 349 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 PABPC5Q96DU9 382 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 KLHL5Q96PQ7 755 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 NUSAP1Q9BXS6 441 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 AGO3Q9H9G7 860 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 ZFYVE28Q9HCC9 887 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 TMEM45AQ9NWC5 275 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 COQ6Q9Y2Z9 468 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 DDNO94850 711 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 PRSS23O95084 383 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 GOT2P00505 430 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 ALBP02768 609 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 CYP11A1P05108 521 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 ENO2P09104 434 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 ODC1P11926 461 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 FUT4P22083 530 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 EEF1DP29692 281 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 RELAQ04206 551 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 XKR7Q5GH72 579 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 ANKS6Q68DC2 871 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 GPR142Q7Z601 462 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 LRRTM3Q86VH5 581 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 STAG3L4Q8TBR4 150 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 CHPT1Q8WUD6 406 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 HMCESQ96FZ2 354 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 PAAF1Q9BRP4 392 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 AARSD1Q9BTE6 412 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 GPN2Q9H9Y4 310 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 NTN4Q9HB63 628 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 FAM105AQ9NUU6 356 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 UXTQ9UBK9 157 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 PCDHGA11Q9Y5H2 935 aa14.76□□□□□ -0.05
SMARCA4-219ENST00000592604 ANKRD36A6QL64 1941 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 FUOMA2VDF0 154 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 CCDC154A6NI56 674 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 SLC22A3O75751 556 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 BAIAP3O94812 1187 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 MOCS2O96007 188 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 C1RP00736 705 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 RPS17P08708 135 aaKnown RBP14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 ZNF182P17025 639 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 SEMA3AQ14563 771 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 FUT11Q495W5 492 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 PYCR3Q53H96 274 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 PIK3R6Q5UE93 754 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 IL31Q6EBC2 164 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 ZNF683Q8IZ20 524 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 ISG20Q96AZ6 181 aaKnown RBP14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 MUS81Q96NY9 551 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 C1QTNF3Q9BXJ4 246 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 PRDM5Q9NQX1 630 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 SLAMF8Q9P0V8 285 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 ANKRD12Q6UB98 2062 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 TMEM221A6NGB7 291 aa14.75□□□□□ -0.05
SMARCA4-219ENST00000592604 TNFRSF10BO14763 440 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms