RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ARHGAP22Q7Z5H3 698 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 NT5DC3Q86UY8 548 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 EXD3Q8N9H8 876 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 SLC35G2Q8TBE7 412 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-205ENST00000592333 TADA1Q96BN2 335 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 IMP4Q96G21 291 aaKnown RBP18.67■□□□□ 0.58
CCDC43-205ENST00000592333 TRIB3Q96RU7 358 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 TRIM39Q9HCM9 518 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 FBXO8Q9NRD0 319 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 STARD5Q9NSY2 213 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 WDR70Q9NW82 654 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 SLC39A1Q9NY26 324 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 TBC1D29Q9UFV1 150 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 ADGRG1Q9Y653 693 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 OAS3Q9Y6K5 1087 aaKnown RBP18.67■□□□□ 0.58
CCDC43-205ENST00000592333 ZFC3H1O60293 1989 aaKnown RBP18.67■□□□□ 0.58
CCDC43-205ENST00000592333 LRRD1A4D1F6 860 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 C3orf70A6NLC5 250 aaPredicted RBP18.66■□□□□ 0.58
CCDC43-205ENST00000592333 FADS2P1A8MWK0 482 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 KCNK1O00180 336 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 CHUKO15111 745 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 GRID2O43424 1007 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 AKR1B10O60218 316 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 UGT1A3P35503 534 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 SLC1A1P43005 524 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 ARSDP51689 593 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 MC2RQ01718 297 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 TCEAL1Q15170 157 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 TMC3Q7Z5M5 1100 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 PHYKPLQ8IUZ5 450 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCDC43-205ENST00000592333 BMPERQ8N8U9 685 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 ART4Q93070 314 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 OLFM3Q96PB7 478 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 EFHD1Q9BUP0 239 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 PACSIN1Q9BY11 444 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 SLC25A51Q9H1U9 297 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 ADNPQ9H2P0 1102 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 INTUQ9ULD6 942 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 B3GALT1Q9Y5Z6 326 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 TENM4Q6N022 2769 aa18.66■□□□□ 0.58
CCDC43-205ENST00000592333 SETXQ7Z333 2677 aaKnown RBP18.66■□□□□ 0.58
CCDC43-205ENST00000592333 LILRA5A6NI73 299 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 APOL1O14791 398 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 TPM1P09493 284 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 XRCC1P18887 633 aaPredicted RBP18.65■□□□□ 0.58
CCDC43-205ENST00000592333 NR2C2P49116 596 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 CDK18Q07002 472 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 SRSF6Q13247 344 aaKnown RBP18.65■□□□□ 0.58
CCDC43-205ENST00000592333 MESDQ14696 234 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 TBR1Q16650 682 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 ZNF569Q5MCW4 686 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 CCDC70Q6NSX1 233 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 CEACAM20Q6UY09 585 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 VASH2Q86V25 355 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 CPNE8Q86YQ8 564 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 TRAM1L1Q8N609 369 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 IL22RA1Q8N6P7 574 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 DTX3LQ8TDB6 740 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 EXTL1Q92935 676 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 CATSPER2Q96P56 530 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 SLC12A9Q9BXP2 914 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 SPRY4Q9C004 299 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 FAM117AQ9C073 453 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 TRIT1Q9H3H1 467 aaKnown RBP18.65■□□□□ 0.58
CCDC43-205ENST00000592333 DDX56Q9NY93 547 aaKnown RBP18.65■□□□□ 0.58
CCDC43-205ENST00000592333 HEY1Q9Y5J3 304 aa18.65■□□□□ 0.58
CCDC43-205ENST00000592333 SDK2Q58EX2 2172 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 TOX3O15405 576 aaPredicted RBP18.64■□□□□ 0.57
CCDC43-205ENST00000592333 VEGFDO43915 354 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 SLC25A14O95258 325 aaPredicted RBP18.64■□□□□ 0.57
CCDC43-205ENST00000592333 EML2O95834 649 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 ANKRD34CP0C6C1 535 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 ACP5P13686 325 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 MAP4P27816 1152 aaKnown RBP18.64■□□□□ 0.57
CCDC43-205ENST00000592333 AP1B1Q10567 949 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 ZBTB17Q13105 803 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 ZDHHC20Q5W0Z9 365 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 PLXDC1Q8IUK5 500 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 CACNA2D3Q8IZS8 1091 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 EID2BQ96D98 161 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 CCDC42Q96M95 316 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 SPATA16Q9BXB7 569 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 ZMYND15Q9H091 742 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 GEMIN8Q9NWZ8 242 aaKnown RBP18.64■□□□□ 0.57
CCDC43-205ENST00000592333 OCIAD1Q9NX40 245 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 TMEM9Q9P0T7 183 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 ATXN10Q9UBB4 475 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 CPNE7Q9UBL6 633 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 TUBD1Q9UJT1 453 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 PILRAQ9UKJ1 303 aa18.64■□□□□ 0.57
CCDC43-205ENST00000592333 HEMK1Q9Y5R4 338 aaPredicted RBP18.64■□□□□ 0.57
CCDC43-205ENST00000592333 EFCAB7A8K855 629 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 SLC28A2O43868 658 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 KCNJ13O60928 360 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 ITGB6P18564 788 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 CRTC2Q53ET0 693 aaPredicted RBP18.63■□□□□ 0.57
CCDC43-205ENST00000592333 TEX44Q53QW1 395 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 ODF2Q5BJF6 829 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms