RNA–Protein interactions for RNA: ENST00000592172.5

RFX2-218, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-218	ENST00000592172	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.62	□□□□□ -0.23
RFX2-218	ENST00000592172	POLH	Q9Y253	713 aa		13.62	□□□□□ -0.23
RFX2-218	ENST00000592172	SLC30A1	Q9Y6M5	507 aa		13.62	□□□□□ -0.23
RFX2-218	ENST00000592172	PRRC2C	Q9Y520	2896 aa	Known RBP	13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	ITPR2	Q14571	2701 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	CDC14C	A4D256	554 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	RFPL1	O75677	317 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	KIAA0754	O94854	1291 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	C9	P02748	559 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	FTL	P02792	175 aa	Predicted RBP	13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	CCDC172	P0C7W6	258 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	RARA	P10276	462 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	SLC2A4	P14672	509 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	GNLY	P22749	145 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	PCK1	P35558	622 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	LEPR	P48357	1165 aa	Known RBP	13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	SEPHS1	P49903	392 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	PMS2	P54278	862 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	ZNF648	Q5T619	568 aa	Predicted RBP	13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	HENMT1	Q5T8I9	393 aa	Known RBP	13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	PPP1R2P3	Q6NXS1	205 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	APTX	Q7Z2E3	356 aa	Known RBP	13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	STAMBPL1	Q96FJ0	436 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	TGM7	Q96PF1	710 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	PLEKHG4B	Q96PX9	1271 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	OR6C1	Q96RD1	312 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	PCDH18	Q9HCL0	1135 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	ARFGAP3	Q9NP61	516 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	CENPE	Q02224	2701 aa		13.61	□□□□□ -0.23
RFX2-218	ENST00000592172	LRRC10B	A6NIK2	292 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	GRID2	O43424	1007 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	KIF1C	O43896	1103 aa	Known RBP	13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	NUAK1	O60285	661 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	DNAJB5	O75953	348 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	AGFG2	O95081	481 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	NDUFA10	O95299	355 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	SPINT3	P49223	89 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	BOLA3	Q53S33	107 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	ALG1L	Q6GMV1	187 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	RASGRP3	Q8IV61	690 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	LPCAT1	Q8NF37	534 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	ZNF653	Q96CK0	615 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	TDRD1	Q9BXT4	1180 aa	Known RBP	13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	TRIM55	Q9BYV6	548 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	POLR1E	Q9GZS1	481 aa	Known RBP	13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	TWSG1	Q9GZX9	223 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	OSGEPL1	Q9H4B0	414 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	RMI1	Q9H9A7	625 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	UCK1	Q9HA47	277 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	KLC4	Q9NSK0	619 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	ATXN10	Q9UBB4	475 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	MYO1A	Q9UBC5	1043 aa		13.6	□□□□□ -0.23
RFX2-218	ENST00000592172	C1orf232	A0A0U1RR37	186 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	PIPSL	A2A3N6	862 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	OR5K4	A6NMS3	321 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	DDX3X	O00571	662 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	MFSD11	O43934	449 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	VPS4B	O75351	444 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	SPAG6	O75602	509 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	CREG1	O75629	220 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	UBXN7	O94888	489 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	RNF224	P0DH78	156 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	ZNF8	P17098	575 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	SERPINB6	P35237	376 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	SLC19A1	P41440	591 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	NIPAL4	Q0D2K0	466 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	MMRN1	Q13201	1228 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	IL11RA	Q14626	422 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	E4F1	Q66K89	784 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	TMEM26	Q6ZUK4	368 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	PHYKPL	Q8IUZ5	450 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	ANKRD20A12P	Q8NF67	263 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	ARRDC2	Q8TBH0	407 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	CT55	Q8WUE5	264 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	LRRN4	Q8WUT4	740 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	LYSMD1	Q96S90	227 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	OR2AG1	Q9H205	316 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	CARD9	Q9H257	536 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	HSD3B7	Q9H2F3	369 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	FAM83D	Q9H4H8	585 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	ZNF768	Q9H5H4	540 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	HAUS4	Q9H6D7	363 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	DTL	Q9NZJ0	730 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	SLC23A2	Q9UGH3	650 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	LNPEP	Q9UIQ6	1025 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	KCND3	Q9UK17	655 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	DNPEP	Q9ULA0	475 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	VPS4A	Q9UN37	437 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	TTLL3	Q9Y4R7	772 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	PCDHGA6	Q9Y5G7	932 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	ADGRG1	Q9Y653	693 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	SCIN	Q9Y6U3	715 aa		13.59	□□□□□ -0.23
RFX2-218	ENST00000592172	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.58	□□□□□ -0.24
RFX2-218	ENST00000592172	GOLGA6L3	A6NEY3	463 aa		13.58	□□□□□ -0.24
RFX2-218	ENST00000592172	LRRC53	A6NM62	1247 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms