RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 TGM7Q96PF1 710 aa15.73■□□□□ 0.11
DDX39A-216ENST00000591275 OR6C1Q96RD1 312 aa15.73■□□□□ 0.11
DDX39A-216ENST00000591275 NUP62CLQ9H1M0 184 aa15.73■□□□□ 0.11
DDX39A-216ENST00000591275 FANCLQ9NW38 375 aa15.73■□□□□ 0.11
DDX39A-216ENST00000591275 OGFRQ9NZT2 677 aa15.73■□□□□ 0.11
DDX39A-216ENST00000591275 VPS18Q9P253 973 aa15.73■□□□□ 0.11
DDX39A-216ENST00000591275 CNOT6Q9ULM6 557 aaKnown RBP15.73■□□□□ 0.11
DDX39A-216ENST00000591275 HIVEP3Q5T1R4 2406 aa15.73■□□□□ 0.11
DDX39A-216ENST00000591275 KIR2DS5A0A0G2JLQ3 304 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 A0A0G2JNG1 304 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 KIR2DS3K7RE56 304 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 NDUFA10O95299 355 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 CLDN7O95471 211 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 SLC2A4P14672 509 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 TCF4P15884 667 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 FERP16591 822 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 IL1R2P27930 398 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 ZNF135P52742 658 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-216ENST00000591275 PMS2P54278 862 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 CDH6P55285 790 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 UBXN1Q04323 297 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 IHHQ14623 411 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 KIR2DS5Q14953 304 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 CT47A1Q5JQC4 288 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-216ENST00000591275 POLNQ7Z5Q5 900 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 GALNT11Q8NCW6 608 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 CSPG4P5Q96PW8 444 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 PLEKHG4BQ96PX9 1271 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 WDR24Q96S15 920 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 TRIM55Q9BYV6 548 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 OSGEPL1Q9H4B0 414 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 EPB41L1Q9H4G0 881 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 ARFGAP3Q9NP61 516 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 LNPEPQ9UIQ6 1025 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 CHKBQ9Y259 395 aa15.72■□□□□ 0.11
DDX39A-216ENST00000591275 SHANK1Q9Y566 2161 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 A1L4Q6 167 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 LILRA5A6NI73 299 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 LGALS16A8MUM7 142 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 FADS2P1A8MWK0 482 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 CREG1O75629 220 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 RASSF9O75901 435 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 C9P02748 559 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 RNF224P0DH78 156 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 CASP14P31944 242 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 LEPRP48357 1165 aaKnown RBP15.71■□□□□ 0.11
DDX39A-216ENST00000591275 UBE2IP63279 158 aaKnown RBP15.71■□□□□ 0.11
DDX39A-216ENST00000591275 DPYSL2Q16555 572 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 SKOR2Q2VWA4 1001 aaPredicted RBP15.71■□□□□ 0.11
DDX39A-216ENST00000591275 PHYKPLQ8IUZ5 450 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 CPT1CQ8TCG5 803 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 SSC4DQ8WTU2 575 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 SYT11Q9BT88 431 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.71■□□□□ 0.11
DDX39A-216ENST00000591275 SCHIP1Q9P0W5 487 aaPredicted RBP15.71■□□□□ 0.11
DDX39A-216ENST00000591275 RCOR3Q9P2K3 495 aaPredicted RBP15.71■□□□□ 0.11
DDX39A-216ENST00000591275 KCND3Q9UK17 655 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 SLC30A1Q9Y6M5 507 aa15.71■□□□□ 0.11
DDX39A-216ENST00000591275 DOPEY1Q5JWR5 2465 aa15.71■□□□□ 0.1
DDX39A-216ENST00000591275 OR5K4A6NMS3 321 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 GRID2O43424 1007 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 KIF1CO43896 1103 aaKnown RBP15.7■□□□□ 0.1
DDX39A-216ENST00000591275 SEMA7AO75326 666 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 UBXN7O94888 489 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 AMD1P17707 334 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 DSC2Q02487 901 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 DNASE1L3Q13609 305 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 ZNF648Q5T619 568 aaPredicted RBP15.7■□□□□ 0.1
DDX39A-216ENST00000591275 IRF2BP2Q7Z5L9 587 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 LPCAT1Q8NF37 534 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 CT55Q8WUE5 264 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 POLR1EQ9GZS1 481 aaKnown RBP15.7■□□□□ 0.1
DDX39A-216ENST00000591275 RMI1Q9H9A7 625 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 KLC4Q9NSK0 619 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 TTLL3Q9Y4R7 772 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 MED13Q9UHV7 2174 aa15.7■□□□□ 0.1
DDX39A-216ENST00000591275 ABCA12Q86UK0 2595 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 C1orf232A0A0U1RR37 186 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 SPAG6O75602 509 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 VIPP01282 170 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 CCDC172P0C7W6 258 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 CCNYL3P0C7X3 344 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 ZNF8P17098 575 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-216ENST00000591275 GARSP41250 739 aaKnown RBP15.69■□□□□ 0.1
DDX39A-216ENST00000591275 IL11RAQ14626 422 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 PLA2G4EQ3MJ16 856 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 NADK2Q4G0N4 442 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 HENMT1Q5T8I9 393 aaKnown RBP15.69■□□□□ 0.1
DDX39A-216ENST00000591275 TXNRD3NBQ6F5E7 133 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 PPP1R2P3Q6NXS1 205 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 CRTC3Q6UUV7 619 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 TMEM26Q6ZUK4 368 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 TRIM48Q8IWZ4 208 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 TEX26Q8N6G2 289 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 ZNF653Q96CK0 615 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 ERGIC2Q96RQ1 377 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 RUFY1Q96T51 708 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 TDRD1Q9BXT4 1180 aaKnown RBP15.69■□□□□ 0.1
DDX39A-216ENST00000591275 OR2AG1Q9H205 316 aa15.69■□□□□ 0.1
DDX39A-216ENST00000591275 ZNF768Q9H5H4 540 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms