RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 IFNB1P01574 187 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 FGGP02679 453 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 GLB1P16278 677 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 LPOP22079 712 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-223ENST00000591239 SPAM1P38567 509 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 ACTR1BP42025 376 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 ACTR1AP61163 376 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 MSLNQ13421 630 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-223ENST00000591239 PEX6Q13608 980 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 LRP8Q14114 963 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 HLTFQ14527 1009 aaKnown RBP eCLIP9.1□□□□□ -0.95
DNMT1-223ENST00000591239 PTPRCAPQ14761 206 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 SIX1Q15475 284 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-223ENST00000591239 TAF1AQ15573 450 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-223ENST00000591239 CCNG2Q16589 344 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 P3H1Q32P28 736 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 C14orf28Q4W4Y0 310 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 CERCAMQ5T4B2 595 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 ZNF648Q5T619 568 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-223ENST00000591239 CDCP2Q5VXM1 449 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 CHST15Q7LFX5 561 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-223ENST00000591239 PHYKPLQ8IUZ5 450 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 REXO1L1PQ8IX06 675 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 TAB3Q8N5C8 712 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-223ENST00000591239 PDCD7Q8N8D1 485 aaKnown RBP9.1□□□□□ -0.95
DNMT1-223ENST00000591239 KDF1Q8NAX2 398 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-223ENST00000591239 DTX3LQ8TDB6 740 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 ZDHHC1Q8WTX9 485 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 MAIP1Q8WWC4 291 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 CCDC74AQ96AQ1 378 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 PDLIM2Q96JY6 352 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 VPS35Q96QK1 796 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 CCDC3Q9BQI4 270 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 OR2AG1Q9H205 316 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 LRRC40Q9H9A6 602 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 RMI1Q9H9A7 625 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 ATXN10Q9UBB4 475 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 RABGEF1Q9UJ41 708 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 TMPRSS11EQ9UL52 423 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 JRKLQ9Y4A0 524 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 ZFHX4Q86UP3 3567 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 RP1P56715 2156 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 USP24Q9UPU5 2620 aa9.1□□□□□ -0.95
DNMT1-223ENST00000591239 GLYATL1P3A0A0U1RQE8 302 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 GPR89AB7ZAQ6 455 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 GAPDHSO14556 408 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 CASC3O15234 703 aaKnown RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 STX7O15400 261 aaKnown RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 PSMD3O43242 534 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 ZSCAN12O43309 604 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 GRID2O43424 1007 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 NUDT21O43809 227 aaKnown RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 VEGFDO43915 354 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 UGT1A9O60656 530 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 MTX2O75431 263 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 ECEL1O95672 775 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 CRTAMO95727 393 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 AP2A1O95782 977 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 CAPNS1P04632 268 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 GPR89BP0CG08 455 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 PNLIPP16233 465 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 ZNF8P17098 575 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 UGT1A6P19224 532 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 UGT1A1P22309 533 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 UGT1A4P22310 534 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 UGT1A3P35503 534 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 UGT1A5P35504 534 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 ACTN2P35609 894 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 MAZP56270 477 aaKnown RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 PDE1BQ01064 536 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 CHRNA6Q15825 494 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 ST3GAL2Q16842 350 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 LONRF2Q1L5Z9 754 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 KHDC1Q4VXA5 237 aaKnown RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 DRICH1Q6PGQ1 229 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 FAM151BQ6UXP7 276 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 ADGRG6Q86SQ4 1221 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 C17orf82Q86X59 251 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 CCDC89Q8N998 374 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 OR4K2Q8NGD2 314 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 WDR48Q8TAF3 677 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 GDAP1Q8TB36 358 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 PATE1Q8WXA2 126 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 DEPDC7Q96QD5 511 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 UGT1A7Q9HAW7 530 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 UGT1A10Q9HAW8 530 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 UGT1A8Q9HAW9 530 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 TRMT1Q9NXH9 659 aaKnown RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 LRIT1Q9P2V4 623 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 FEZ2Q9UHY8 353 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-223ENST00000591239 APPL1Q9UKG1 709 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 ZKSCAN5Q9Y2L8 839 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 KCTD3Q9Y597 815 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 RNF215Q9Y6U7 377 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 SCN8AQ9UQD0 1980 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 NBEAQ8NFP9 2946 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 MYLKQ15746 1914 aa9.09□□□□□ -0.95
DNMT1-223ENST00000591239 ANKRD11Q6UB99 2663 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-223ENST00000591239 NTN3O00634 580 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-223ENST00000591239 CHUKO15111 745 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms