RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 CRLS1Q9UJA2 301 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 GPR34Q9UPC5 381 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 VPS9D1Q9Y2B5 631 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 CA5BQ9Y2D0 317 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 KCTD3Q9Y597 815 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 DNMT3AQ9Y6K1 912 aaPredicted RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 SLCO1B1Q9Y6L6 691 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 CSNK1G3Q9Y6M4 447 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 PLXND1Q9Y4D7 1925 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 TRBV5-4A0A0C4DH59 114 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 PRSS38A1L453 326 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 CCDC162PA2VCL2 907 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 TMEM202A6NGA9 273 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 E7ESA3 106 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 GAPDHSO14556 408 aaPredicted RBP8.98□□□□□ -0.97
CIRBP-218ENST00000588344 INPP4BO15327 924 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 TP73O15350 636 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 UGT1A9O60656 530 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 SLU7O95391 586 aaKnown RBP8.98□□□□□ -0.97
CIRBP-218ENST00000588344 CEACAM5P06731 702 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 TUBBP07437 444 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 GSTA2P09210 222 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 ALPPL2P10696 532 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 JUNDP17535 347 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 UGT1A6P19224 532 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 MSH3P20585 1137 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 UGT1A1P22309 533 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 UGT1A4P22310 534 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 PMLP29590 882 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 UGT1A3P35503 534 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 UGT1A5P35504 534 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 TTPAP49638 278 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 CCT8P50990 548 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 CRADDP78560 199 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 BNC1Q01954 994 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 DHX9Q08211 1270 aaKnown RBP8.98□□□□□ -0.97
CIRBP-218ENST00000588344 EIF2B5Q13144 721 aaKnown RBP8.98□□□□□ -0.97
CIRBP-218ENST00000588344 LRP8Q14114 963 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 ITIH4Q14624 930 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 PTPRCAPQ14761 206 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 ELOCQ15369 112 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 SF3A2Q15428 464 aaKnown RBP8.98□□□□□ -0.97
CIRBP-218ENST00000588344 LONRF1Q17RB8 773 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 BBS9Q3SYG4 887 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 ZRANB3Q5FWF4 1079 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 SPANXN3Q5MJ09 141 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 FNBP1LQ5T0N5 605 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 RNF187Q5TA31 235 aaPredicted RBP8.98□□□□□ -0.97
CIRBP-218ENST00000588344 ZNF449Q6P9G9 518 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 DBX2Q6ZNG2 339 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 CYS1Q717R9 158 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 TAS2R42Q7RTR8 314 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 GALNT13Q8IUC8 556 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 PELI3Q8N2H9 469 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 NXPE1Q8N323 547 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 DCLK2Q8N568 766 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 MINDY1Q8N5J2 469 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 GPR150Q8NGU9 434 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 PYROXD1Q8WU10 500 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 EDEM2Q9BV94 578 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 LGR4Q9BXB1 951 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 VPS37BQ9H9H4 285 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 UGT1A7Q9HAW7 530 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 UGT1A10Q9HAW8 530 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 UGT1A8Q9HAW9 530 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 PARD6AQ9NPB6 346 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 TM7SF3Q9NS93 570 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 DNAJC28Q9NX36 388 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 GRHL1Q9NZI5 618 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 NCKIPSDQ9NZQ3 722 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 ZC3H7BQ9UGR2 993 aaKnown RBP8.98□□□□□ -0.97
CIRBP-218ENST00000588344 FNDC3AQ9Y2H6 1198 aaKnown RBP8.98□□□□□ -0.97
CIRBP-218ENST00000588344 TEX264Q9Y6I9 313 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 RPS6KL1Q9Y6S9 549 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 FAM169AQ9Y6X4 670 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 SHROOM3Q8TF72 1996 aa8.98□□□□□ -0.97
CIRBP-218ENST00000588344 MUC6Q6W4X9 2439 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 FRYLO94915 3013 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 BHMG1C9JSJ3 638 aaPredicted RBP8.97□□□□□ -0.97
CIRBP-218ENST00000588344 CDX4O14627 284 aaPredicted RBP8.97□□□□□ -0.97
CIRBP-218ENST00000588344 TPP1O14773 563 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 CHUKO15111 745 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 SCAMP1O15126 338 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 KMOO15229 486 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 CD3EAPO15446 510 aaKnown RBP8.97□□□□□ -0.97
CIRBP-218ENST00000588344 GRID2O43424 1007 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 NUAK1O60285 661 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 SPAG6O75602 509 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 AP2A2O94973 939 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 VAPBO95292 243 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 GOT2P00505 430 aaKnown RBP8.97□□□□□ -0.97
CIRBP-218ENST00000588344 ATP1B2P14415 290 aaPredicted RBP8.97□□□□□ -0.97
CIRBP-218ENST00000588344 ZNF7P17097 686 aaPredicted RBP8.97□□□□□ -0.97
CIRBP-218ENST00000588344 VCLP18206 1134 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 DGKAP23743 735 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 MCM3P25205 808 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 ACRV1P26436 265 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 NMBRP28336 390 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 AKT1P31749 480 aa8.97□□□□□ -0.97
CIRBP-218ENST00000588344 ELK3P41970 407 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms