RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 NRROSQ86YC3 692 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 PHYKPLQ8IUZ5 450 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 REXO1L1PQ8IX06 675 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 KLHDC8BQ8IXV7 354 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 GPR156Q8NFN8 814 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 RTP4Q96DX8 246 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 PDLIM2Q96JY6 352 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 LRRC40Q9H9A6 602 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 TRIM39Q9HCM9 518 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 ARFGAP3Q9NP61 516 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 IL26Q9NPH9 171 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 SPATS2LQ9NUQ6 558 aaKnown RBP19.02■□□□□ 0.64
CIRBP-217ENST00000588230 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.02■□□□□ 0.64
CIRBP-217ENST00000588230 TAAR2Q9P1P5 351 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 FEZ2Q9UHY8 353 aaPredicted RBP19.02■□□□□ 0.64
CIRBP-217ENST00000588230 CLCA2Q9UQC9 943 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 JRKLQ9Y4A0 524 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 PLEKHM1Q9Y4G2 1056 aa19.02■□□□□ 0.64
CIRBP-217ENST00000588230 DNAJC6O75061 913 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 CRTAMO95727 393 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 MT-CO3P00414 261 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 LPOP22079 712 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-217ENST00000588230 ACTR1BP42025 376 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 ACTR1AP61163 376 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 LRP8Q14114 963 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 SIX1Q15475 284 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-217ENST00000588230 LONRF2Q1L5Z9 754 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 PERM1Q5SV97 790 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 ZNF648Q5T619 568 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-217ENST00000588230 KCTD11Q693B1 232 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 CCDC89Q8N998 374 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 OR6C4Q8NGE1 309 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 BRSK1Q8TDC3 778 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 OR2AG1Q9H205 316 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 ARNT2Q9HBZ2 717 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 TRMT1Q9NXH9 659 aaKnown RBP19.01■□□□□ 0.63
CIRBP-217ENST00000588230 ATXN10Q9UBB4 475 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 ZKSCAN5Q9Y2L8 839 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 RAXQ9Y2V3 346 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 PRKAB1Q9Y478 270 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 ARL5AQ9Y689 179 aa19.01■□□□□ 0.63
CIRBP-217ENST00000588230 URB1O60287 2271 aaKnown RBP19■□□□□ 0.63
CIRBP-217ENST00000588230 GLYATL1P3A0A0U1RQE8 302 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 CASC3O15234 703 aaKnown RBP19■□□□□ 0.63
CIRBP-217ENST00000588230 NUAK1O60285 661 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 NOBOXO60393 691 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 MSNP26038 577 aaKnown RBP19■□□□□ 0.63
CIRBP-217ENST00000588230 PDE1BQ01064 536 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 CHRNA6Q15825 494 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 ATP13A5Q4VNC0 1218 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 C14orf28Q4W4Y0 310 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 DENND5AQ6IQ26 1287 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 FAM151BQ6UXP7 276 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 CHST15Q7LFX5 561 aaPredicted RBP19■□□□□ 0.63
CIRBP-217ENST00000588230 SFTPA2Q8IWL1 248 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 GDAP1Q8TB36 358 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 DTX3LQ8TDB6 740 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 ZDHHC1Q8WTX9 485 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 CCDC74AQ96AQ1 378 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 VPS35Q96QK1 796 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 CCDC3Q9BQI4 270 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 ST14Q9Y5Y6 855 aa19■□□□□ 0.63
CIRBP-217ENST00000588230 SCN8AQ9UQD0 1980 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 GPR89AB7ZAQ6 455 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 GRID2O43424 1007 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 KIF5CO60282 957 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 AP2A1O95782 977 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 GPR89BP0CG08 455 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 ZNF8P17098 575 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-217ENST00000588230 FDFT1P37268 417 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 LMAN1P49257 510 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 BIRC2Q13490 618 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 PTPRCAPQ14761 206 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 RTP5Q14D33 572 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 DRICH1Q6PGQ1 229 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-217ENST00000588230 ADGRG6Q86SQ4 1221 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 OR4K2Q8NGD2 314 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 NXPE2Q96DL1 559 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 PBKQ96KB5 322 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 NRSN2Q9GZP1 204 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 SYNDIG1Q9H7V2 258 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 ETNK1Q9HBU6 452 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 HOMER3Q9NSC5 361 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 DRG1Q9Y295 367 aaKnown RBP18.99■□□□□ 0.63
CIRBP-217ENST00000588230 KCTD3Q9Y597 815 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 LOC400499M0QZD8 3231 aa18.99■□□□□ 0.63
CIRBP-217ENST00000588230 ERI2A8K979 691 aaKnown RBP18.98■□□□□ 0.63
CIRBP-217ENST00000588230 E7EVH7 732 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 VEGFDO43915 354 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 UGT1A9O60656 530 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 ACP5P13686 325 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 ETS1P14921 441 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 GLB1P16278 677 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 TPH1P17752 444 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 UGT1A6P19224 532 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 UGT1A1P22309 533 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 UGT1A4P22310 534 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 UGT1A3P35503 534 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 UGT1A5P35504 534 aa18.98■□□□□ 0.63
CIRBP-217ENST00000588230 ITGA9Q13797 1035 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms