RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 STN1Q9H668 368 aaKnown RBP13.21□□□□□ -0.29
PKN1-211ENST00000588200 TRIM39Q9HCM9 518 aa13.21□□□□□ -0.29
PKN1-211ENST00000588200 FBXO8Q9NRD0 319 aa13.21□□□□□ -0.29
PKN1-211ENST00000588200 TBC1D29Q9UFV1 150 aa13.21□□□□□ -0.29
PKN1-211ENST00000588200 PCYT1BQ9Y5K3 369 aaPredicted RBP13.21□□□□□ -0.29
PKN1-211ENST00000588200 SPENQ96T58 3664 aaKnown RBP13.2□□□□□ -0.3
PKN1-211ENST00000588200 COL12A1Q99715 3063 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 LILRA5A6NI73 299 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 GRID2O43424 1007 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 MAP3K6O95382 1288 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 EML2O95834 649 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 WT1P19544 449 aaPredicted RBP13.2□□□□□ -0.3
PKN1-211ENST00000588200 PTMSP20962 102 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 UGT1A3P35503 534 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 CD86P42081 329 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 ATP1A2P50993 1020 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 MC2RQ01718 297 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 ZBTB17Q13105 803 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 SRSF6Q13247 344 aaKnown RBP13.2□□□□□ -0.3
PKN1-211ENST00000588200 TAZQ16635 292 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 DCAF12Q5T6F0 453 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 NKAIN2Q5VXU1 208 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 WASH2PQ6VEQ5 465 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 SLC9B2Q86UD5 537 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 TRIM74Q86UV6 250 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 NT5DC3Q86UY8 548 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 TRAM1L1Q8N609 369 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 CCNYQ8ND76 341 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 LPCAT1Q8NF37 534 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 SLC35G2Q8TBE7 412 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 PACSIN1Q9BY11 444 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 ADNPQ9H2P0 1102 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 SUDS3Q9H7L9 328 aaPredicted RBP13.2□□□□□ -0.3
PKN1-211ENST00000588200 ZFYVE1Q9HBF4 777 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 WASH6PQ9NQA3 447 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 ZNHIT2Q9UHR6 403 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 PILRAQ9UKJ1 303 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 INTUQ9ULD6 942 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 B3GALT1Q9Y5Z6 326 aa13.2□□□□□ -0.3
PKN1-211ENST00000588200 KCNK1O00180 336 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 PPP1R12AO14974 1030 aaPredicted RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 INPP4BO15327 924 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 TOX3O15405 576 aaPredicted RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 ASMTLO95671 621 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 ATP1A1P05023 1023 aaKnown RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 ANKRD34CP0C6C1 535 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 XRCC1P18887 633 aaPredicted RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 SLC1A1P43005 524 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 NR2C2P49116 596 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 UBE2IP63279 158 aaKnown RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 TBR1Q16650 682 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 CRTC2Q53ET0 693 aaPredicted RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 MARK2Q7KZI7 788 aaKnown RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 BZW1Q7L1Q6 419 aaKnown RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 CHST15Q7LFX5 561 aaPredicted RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 ART4Q93070 314 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 AHCYL2Q96HN2 611 aaKnown RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 PLEKHG4BQ96PX9 1271 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 VPS35Q96QK1 796 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 GEMIN8Q9NWZ8 242 aaKnown RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 OCIAD1Q9NX40 245 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 SLC39A1Q9NY26 324 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 TMEM9Q9P0T7 183 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 ATXN10Q9UBB4 475 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 TUBD1Q9UJT1 453 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 TTLL3Q9Y4R7 772 aa13.19□□□□□ -0.3
PKN1-211ENST00000588200 TMEM184BQ9Y519 407 aaPredicted RBP13.19□□□□□ -0.3
PKN1-211ENST00000588200 MN1Q10571 1320 aaPredicted RBP13.18□□□□□ -0.3
PKN1-211ENST00000588200 CBFA2T2O43439 604 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 VEGFDO43915 354 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 KCNJ13O60928 360 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 EPOP01588 193 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 C9P02748 559 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 MAP4P27816 1152 aaKnown RBP13.18□□□□□ -0.3
PKN1-211ENST00000588200 HADHBP55084 474 aaKnown RBP13.18□□□□□ -0.3
PKN1-211ENST00000588200 CDK18Q07002 472 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 MAP7Q14244 749 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 MESDQ14696 234 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 TEX44Q53QW1 395 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 ABRAXAS1Q6UWZ7 409 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 CEACAM20Q6UY09 585 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 VASH2Q86V25 355 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 PHYKPLQ8IUZ5 450 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 GPR26Q8NDV2 337 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 HTR3CQ8WXA8 447 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 EXTL1Q92935 676 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 PMEPA1Q969W9 287 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 RTP4Q96DX8 246 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 SLC45A3Q96JT2 553 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 TEKT5Q96M29 485 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 CATSPER2Q96P56 530 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 ARHGAP9Q9BRR9 750 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 TIMM29Q9BSF4 260 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 EFHD1Q9BUP0 239 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 TRIT1Q9H3H1 467 aaKnown RBP13.18□□□□□ -0.3
PKN1-211ENST00000588200 ABHD10Q9NUJ1 306 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 ZNHIT6Q9NWK9 470 aaKnown RBP13.18□□□□□ -0.3
PKN1-211ENST00000588200 DDX56Q9NY93 547 aaKnown RBP13.18□□□□□ -0.3
PKN1-211ENST00000588200 CPNE7Q9UBL6 633 aa13.18□□□□□ -0.3
PKN1-211ENST00000588200 RELNP78509 3460 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms