RNA–Protein interactions for RNA: ENST00000586312.5

PSME3-208, Transcript of proteasome activator subunit 3, human

TSL 5

Gene PSME3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME3-208	ENST00000586312	AK5	Q9Y6K8	562 aa		13.66	□□□□□ -0.22
PSME3-208	ENST00000586312		A0A1W2PQM1	296 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	PMS2P1	A4D2B8	440 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	AP3B1	O00203	1094 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	STX7	O15400	261 aa	Known RBP	13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	AK4	P27144	223 aa	Predicted RBP	13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	DCDC1	P59894	354 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	CCL7	P80098	99 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	GTF2H3	Q13889	308 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	COL28A1	Q2UY09	1125 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	ALS2CL	Q60I27	953 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	DOK6	Q6PKX4	331 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	PPP1R21	Q6ZMI0	780 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	TAF8	Q7Z7C8	310 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	TRIM74	Q86UV6	250 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	GALNT13	Q8IUC8	556 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	PHYKPL	Q8IUZ5	450 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	DNAAF3	Q8N9W5	541 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	GDAP1	Q8TB36	358 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	C1orf54	Q8WWF1	131 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	ATG4A	Q8WYN0	398 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	CCDC74A	Q96AQ1	378 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	SCARF2	Q96GP6	870 aa	Predicted RBP	13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	CRELD1	Q96HD1	420 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	PRR11	Q96HE9	360 aa	Predicted RBP	13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	COX14	Q96I36	57 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	MRGPRX2	Q96LB1	330 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	PLEKHG4B	Q96PX9	1271 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	DEPDC7	Q96QD5	511 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	TLR10	Q9BXR5	811 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	GSDMC	Q9BYG8	508 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	ABCG4	Q9H172	646 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	CNOT6	Q9ULM6	557 aa	Known RBP	13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	SUFU	Q9UMX1	484 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	SLC17A4	Q9Y2C5	497 aa		13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	R3HDM2	Q9Y2K5	976 aa	Known RBP	13.65	□□□□□ -0.22
PSME3-208	ENST00000586312	SDK2	Q58EX2	2172 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312		A0A087WV48	116 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	PGRMC1	O00264	195 aa	Known RBP	13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	INPP4B	O15327	924 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	USP12	O75317	370 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	MPO	P05164	745 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	CXCR5	P32302	372 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	HMGCL	P35914	325 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	SPAM1	P38567	509 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	ITGA9	Q13797	1035 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	TMC3	Q7Z5M5	1100 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	C17orf82	Q86X59	251 aa	Predicted RBP	13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	SLC35F6	Q8N357	371 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	TRAM1L1	Q8N609	369 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	FAM46D	Q8NEK8	389 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	OR6C4	Q8NGE1	309 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	NAT6	Q93015	286 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	ATXN7L3B	Q96GX2	97 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	RMI1	Q9H9A7	625 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	APPL1	Q9UKG1	709 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	LHX6	Q9UPM6	363 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	TMEM98	Q9Y2Y6	226 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	OAS3	Q9Y6K5	1087 aa	Known RBP	13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	LOC400499	M0QZD8	3231 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	MGA	Q8IWI9	3026 aa		13.64	□□□□□ -0.23
PSME3-208	ENST00000586312	TCRBV7S2A1N4T	A0A589	114 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	FADS2P1	A8MWK0	482 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	GPR89A	B7ZAQ6	455 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	SLC25A14	O95258	325 aa	Predicted RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	AGT	P01019	485 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	IVL	P07476	585 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	GPR89B	P0CG08	455 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	TCP1	P17987	556 aa	Known RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	VCL	P18206	1134 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	LPO	P22079	712 aa	Predicted RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	ITPKB	P27987	946 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	HADHA	P40939	763 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	EIF2S3	P41091	472 aa	Known RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	GNPDA1	P46926	289 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	GNG11	P61952	73 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	GABRE	P78334	506 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	SARNP	P82979	210 aa	Known RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	LRP8	Q14114	963 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	TAF1A	Q15573	450 aa	Predicted RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	CERCAM	Q5T4B2	595 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	HENMT1	Q5T8I9	393 aa	Known RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	B3GNT8	Q7Z7M8	397 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	SNIP1	Q8TAD8	396 aa	Known RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	GRK7	Q8WTQ7	553 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	PATE1	Q8WXA2	126 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	KCNF1	Q9H3M0	494 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	STN1	Q9H668	368 aa	Known RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	ASCL3	Q9NQ33	180 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	VPS18	Q9P253	973 aa		13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	DRG1	Q9Y295	367 aa	Known RBP	13.63	□□□□□ -0.23
PSME3-208	ENST00000586312	RNF215	Q9Y6U7	377 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms