RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 C1orf61Q13536 156 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 TPSAB1Q15661 275 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 ALS2CLQ60I27 953 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 KDM7AQ6ZMT4 941 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 RFLNAQ6ZTI6 216 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 DNAAF3Q8N9W5 541 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 GLIS1Q8NBF1 620 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 GPR156Q8NFN8 814 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 MAGOHBQ96A72 148 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 AGAP2Q99490 1192 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 TIMM29Q9BSF4 260 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 TMEM168Q9H0V1 697 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 STN1Q9H668 368 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 IL26Q9NPH9 171 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 MRPL40Q9NQ50 206 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 GPR34Q9UPC5 381 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 MSRB2Q9Y3D2 182 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 DNMT3AQ9Y6K1 912 aaPredicted RBP13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 DNAH14Q0VDD8 3507 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 OR5K4A6NMS3 321 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 AGAP14A8MT82 685 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 CFAP99D6REC4 459 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 F8W8V4 182 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 QSOX1O00391 747 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 NDC80O14777 642 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 AURKAO14965 403 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 KMOO15229 486 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 GRID2O43424 1007 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 NUDT21O43809 227 aaKnown RBP13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 SRP72O76094 671 aaKnown RBP13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 PRAMEF1O95521 474 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 APRTP07741 180 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 RALBP11234 206 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 GLB1P16278 677 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 MAGEA6P43360 314 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 FOXC1Q12948 553 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 SKIDA1Q1XH10 827 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 C14orf28Q4W4Y0 310 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 TTC27Q6P3X3 843 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 CCDC137Q6PK04 289 aaKnown RBP13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 DOK6Q6PKX4 331 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 SYDE1Q6ZW31 735 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 SNX20Q7Z614 316 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 SLCO6A1Q86UG4 719 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 LRRTM4Q86VH4 590 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 CREG2Q8IUH2 290 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 TAB3Q8N5C8 712 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 TTC25Q96NG3 672 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 CASS4Q9NQ75 786 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 NLE1Q9NVX2 485 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 PADI4Q9UM07 663 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 WASF3Q9UPY6 502 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 ARL5AQ9Y689 179 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 SLC30A1Q9Y6M5 507 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 LAMA1P25391 3075 aa13.67□□□□□ -0.22
PRKCSH-202ENST00000585540 GOLGA4Q13439 2230 aaKnown RBP13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 A0A0U1RQS6 177 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 TMEM8BA6NDV4 472 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 GOLGA8CPA6NN73 597 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 CCDC188H7C350 402 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 LDB2O43679 373 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 CDK14O94921 469 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 ECEL1O95672 775 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 TUBB4AP04350 444 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 GSTM1P09488 218 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 ADRA1DP25100 572 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 RPL22P35268 128 aaKnown RBP13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 COILP38432 576 aaPredicted RBP13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 PAFAH1B1P43034 410 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 BASP1P80723 227 aaKnown RBP13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 CTBSQ01459 385 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 GSTM4Q03013 218 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 NFATC2Q13469 925 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 OLIG2Q13516 323 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 ATP13A5Q4VNC0 1218 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 ADGRG6Q86SQ4 1221 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 C17orf82Q86X59 251 aaPredicted RBP13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 SLC35F3Q8IY50 421 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 FAM46DQ8NEK8 389 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 OR4K2Q8NGD2 314 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 IFI44Q8TCB0 444 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 ZNF398Q8TD17 642 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 SLCO2A1Q92959 643 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 SGSM3Q96HU1 749 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 TTC1Q99614 292 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 APOL2Q9BQE5 337 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 IL22Q9GZX6 179 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 DPEP2Q9H4A9 486 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 MRM3Q9HC36 420 aaKnown RBP13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 BPIFA1Q9NP55 256 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 BFARQ9NZS9 450 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 ATXN10Q9UBB4 475 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 GPSM3Q9Y4H4 160 aa13.66□□□□□ -0.22
PRKCSH-202ENST00000585540 LY6G6EA0A0G2JKS1 128 aa13.65□□□□□ -0.22
PRKCSH-202ENST00000585540 MROH6A6NGR9 719 aa13.65□□□□□ -0.22
PRKCSH-202ENST00000585540 SMAPO00193 183 aa13.65□□□□□ -0.22
PRKCSH-202ENST00000585540 USP12O75317 370 aa13.65□□□□□ -0.22
PRKCSH-202ENST00000585540 ZSCAN5DPP0CG00 497 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms