RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 OR51F1A6NGY5 319 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 TARM1B6A8C7 271 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 G3V2L1 256 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 MAN2B1O00754 1011 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 LILRB5O75023 590 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 TULP3O75386 442 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 VPS26AO75436 327 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 ATP5HO75947 161 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 SRP72O76094 671 aaKnown RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 WISP3O95389 354 aaPredicted RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 PIGNO95427 931 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 TDGF1P13385 188 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 PKMP14618 531 aaKnown RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 ZNF7P17097 686 aaPredicted RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 CTPS1P17812 591 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 RPS3P23396 243 aaKnown RBP eCLIP10.33□□□□□ -0.76
LIG3-203ENST00000585370 ATP5F1P24539 256 aaPredicted RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 EIF2DP41214 584 aaKnown RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 ARFIP2P53365 341 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 ABCE1P61221 599 aaKnown RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 ATP6V0D1P61421 351 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 IRX4P78413 519 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 XIAPP98170 497 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 IRF9Q00978 393 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 FCHO2Q0JRZ9 810 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 PDAP1Q13442 181 aaKnown RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 PEX6Q13608 980 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 PTPRCAPQ14761 206 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 CDKN3Q16667 212 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 ZRANB3Q5FWF4 1079 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 ZNF789Q5FWF6 425 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 RBM20Q5T481 1227 aaKnown RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 LIPMQ5VYY2 423 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 MAMSTRQ6ZN01 415 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 TAS2R42Q7RTR8 314 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 LYSMD3Q7Z3D4 306 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 SNX20Q7Z614 316 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 SLC22A9Q8IVM8 553 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 CENPLQ8N0S6 344 aaPredicted RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 FSTL5Q8N475 847 aaPredicted RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 TMEM151AQ8N4L1 468 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 NKAPQ8N5F7 415 aaKnown RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 ACVR1CQ8NER5 493 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 OR2A12Q8NGT7 310 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 FRS2Q8WU20 508 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 HEXDCQ8WVB3 486 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 KCTD4Q8WVF5 259 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 FAM3CQ92520 227 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 LPGAT1Q92604 370 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 ULK4Q96C45 1275 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 NXNL1Q96CM4 212 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 MRGPRX3Q96LB0 322 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 GPR78Q96P69 363 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 OLFM1Q99784 485 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 MECRQ9BV79 373 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 CHRDQ9H2X0 955 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 ZDHHC6Q9H6R6 413 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 ECT2Q9H8V3 914 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 LMAN1LQ9HAT1 526 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 POLR3BQ9NW08 1133 aaPredicted RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 TMCO1Q9UM00 188 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 NDRG2Q9UN36 371 aaKnown RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 CRYL1Q9Y2S2 319 aa10.33□□□□□ -0.76
LIG3-203ENST00000585370 NUP210Q8TEM1 1887 aaPredicted RBP10.33□□□□□ -0.76
LIG3-203ENST00000585370 TRBV5-4A0A0C4DH59 114 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 MED19A0JLT2 244 aaPredicted RBP10.32□□□□□ -0.76
LIG3-203ENST00000585370 SLCO1B7G3V0H7 640 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 CCL22O00626 93 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 PRMT5O14744 637 aaPredicted RBP10.32□□□□□ -0.76
LIG3-203ENST00000585370 NPHS1O60500 1241 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 RHOBTB1O94844 696 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 PRNPP04156 253 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 CCDC166P0CW27 439 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 CHRNB1P11230 501 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 KCNA4P22459 653 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 SPAM1P38567 509 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 RUNX3Q13761 415 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 CSHL1Q14406 222 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 PUM1Q14671 1186 aaKnown RBP eCLIP10.32□□□□□ -0.76
LIG3-203ENST00000585370 CRY1Q16526 586 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 GEN1Q17RS7 908 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 TMEM215Q68D42 235 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 ZNF549Q6P9A3 640 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 CRTC1Q6UUV9 634 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 Q6ZVU0 165 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 DGLUCYQ7Z3D6 616 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 TMIEQ8NEW7 156 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 OR6K2Q8NGY2 324 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 RHEBL1Q8TAI7 183 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 PIWIL2Q8TC59 973 aaKnown RBP10.32□□□□□ -0.76
LIG3-203ENST00000585370 GRIN3AQ8TCU5 1115 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 C10orf82Q8WW14 230 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 KCNJ9Q92806 393 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 CNDP1Q96KN2 507 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 PLEKHG4BQ96PX9 1271 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 LRRC37BQ96QE4 947 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 NDNQ99608 321 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 CIPCQ9C0C6 399 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 ILKAPQ9H0C8 392 aaPredicted RBP10.32□□□□□ -0.76
LIG3-203ENST00000585370 WWP1Q9H0M0 922 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms