RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 RACK1P63244 317 aaKnown RBP18.16■□□□□ 0.5
RFFL-211ENST00000584541 CDK3Q00526 305 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 NAB1Q13506 487 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 SLC29A2Q14542 456 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 KLHL38Q2WGJ6 581 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 RNF187Q5TA31 235 aaPredicted RBP18.16■□□□□ 0.5
RFFL-211ENST00000584541 KYAT3Q6YP21 454 aaKnown RBP18.16■□□□□ 0.5
RFFL-211ENST00000584541 GCNT7Q6ZNI0 430 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 PRR23BQ6ZRT6 265 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 KIAA0408Q6ZU52 694 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 SERPINA9Q86WD7 417 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 CILP2Q8IUL8 1156 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 CNTN4Q8IWV2 1026 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 CTAGE3PQ8IX95 158 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 PELI3Q8N2H9 469 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 TMEM145Q8NBT3 493 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 HEXDCQ8WVB3 486 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 COPS8Q99627 209 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 APOOQ9BUR5 198 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 TEX101Q9BY14 249 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 ZCCHC2Q9C0B9 1178 aaKnown RBP18.16■□□□□ 0.5
RFFL-211ENST00000584541 ACSS3Q9H6R3 686 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 ARFGAP3Q9NP61 516 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 MARCH4Q9P2E8 410 aaPredicted RBP18.16■□□□□ 0.5
RFFL-211ENST00000584541 RABGEF1Q9UJ41 708 aa18.16■□□□□ 0.5
RFFL-211ENST00000584541 POM121BA6NF01 834 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 FAM159BA6NKW6 160 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 CFAP99D6REC4 459 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 GPR39O43194 453 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 PRSS56P0CW18 603 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 MYCLP1P12525 358 aaPredicted RBP18.15■□□□□ 0.5
RFFL-211ENST00000584541 GNSP15586 552 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 KELP23276 732 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 HTR1BP28222 390 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 AKT1P31749 480 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 DPP6P42658 865 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 SLC1A2P43004 574 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 RABIFP47224 123 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 CDKN1CP49918 316 aaPredicted RBP18.15■□□□□ 0.5
RFFL-211ENST00000584541 THOP1P52888 689 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 ITIH4Q14624 930 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 KBTBD12Q3ZCT8 623 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 GPRC6AQ5T6X5 926 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 TEDDM1Q5T9Z0 273 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 ABI3BPQ7Z7G0 1075 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 SLC26A11Q86WA9 606 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 PIANPQ8IYJ0 282 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 DDHD1Q8NEL9 900 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 UHMK1Q8TAS1 419 aaKnown RBP18.15■□□□□ 0.5
RFFL-211ENST00000584541 SKA1Q96BD8 255 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 DCUN1D1Q96GG9 259 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 BMFQ96LC9 184 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 SLC6A18Q96N87 628 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 ORAI3Q9BRQ5 295 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 IRF2BPLQ9H1B7 796 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 INTS10Q9NVR2 710 aaKnown RBP18.15■□□□□ 0.5
RFFL-211ENST00000584541 ZDHHC3Q9NYG2 299 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 SUSD2Q9UGT4 822 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 FBXO5Q9UKT4 447 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 RAB23Q9ULC3 237 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 CA5BQ9Y2D0 317 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 OR1A2Q9Y585 309 aa18.15■□□□□ 0.5
RFFL-211ENST00000584541 PRR5-ARHGAP8B1AHC4 643 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 MAGEC1O60732 1142 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 HOXC4P09017 264 aaPredicted RBP18.14■□□□□ 0.49
RFFL-211ENST00000584541 ZNF7P17097 686 aaPredicted RBP18.14■□□□□ 0.49
RFFL-211ENST00000584541 MSH3P20585 1137 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 CD38P28907 300 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 PFN3P60673 137 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 CTBP1Q13363 440 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 GTF2H3Q13889 308 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 PTK2BQ14289 1009 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 SEMA3AQ14563 771 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 DBN1Q16643 649 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 TYSND1Q2T9J0 566 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 BEND6Q5SZJ8 279 aaPredicted RBP18.14■□□□□ 0.49
RFFL-211ENST00000584541 UBAP2Q5T6F2 1119 aaKnown RBP18.14■□□□□ 0.49
RFFL-211ENST00000584541 Q6ZSR6 202 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 MICALCLQ6ZW33 695 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 LDB1Q86U70 411 aaPredicted RBP18.14■□□□□ 0.49
RFFL-211ENST00000584541 LRRC6Q86X45 466 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 DENND6AQ8IWF6 608 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 RBFAQ8N0V3 343 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 PPM1NQ8N819 430 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 MFSD2AQ8NA29 543 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 C2CD4AQ8NCU7 369 aaPredicted RBP18.14■□□□□ 0.49
RFFL-211ENST00000584541 FUBP1Q96AE4 644 aaKnown RBP18.14■□□□□ 0.49
RFFL-211ENST00000584541 KLHDC7BQ96G42 594 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 COX14Q96I36 57 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 TRIM39Q9HCM9 518 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 TM9SF3Q9HD45 589 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 TMPRSS11EQ9UL52 423 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 CNOT6Q9ULM6 557 aaKnown RBP18.14■□□□□ 0.49
RFFL-211ENST00000584541 IKBKGQ9Y6K9 419 aa18.14■□□□□ 0.49
RFFL-211ENST00000584541 TP53BP1Q12888 1972 aaPredicted RBP18.13■□□□□ 0.49
RFFL-211ENST00000584541 EXOC1LA0A1B0GW35 172 aa18.13■□□□□ 0.49
RFFL-211ENST00000584541 F8W8V4 182 aa18.13■□□□□ 0.49
RFFL-211ENST00000584541 H0Y8X5 98 aa18.13■□□□□ 0.49
RFFL-211ENST00000584541 BCAT2O15382 392 aaPredicted RBP18.13■□□□□ 0.49
RFFL-211ENST00000584541 VEGFDO43915 354 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms