RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 B4GALNT1Q00973 533 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 ZFP36L1Q07352 338 aaKnown RBP9.8□□□□□ -0.84
SKA2-208ENST00000583927 ZNF569Q5MCW4 686 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 ANKRD20A2Q5SQ80 823 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 CCDC181Q5TID7 509 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 ANKRD20A1Q5TYW2 823 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 ANKRD20A3Q5VUR7 823 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 KDELC2Q7Z4H8 507 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 TRIM74Q86UV6 250 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 PHYKPLQ8IUZ5 450 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 SFRP1Q8N474 314 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 ARL14Q8N4G2 192 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 TTC30BQ8N4P2 665 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 AVL9Q8NBF6 648 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 WDR36Q8NI36 951 aaKnown RBP9.8□□□□□ -0.84
SKA2-208ENST00000583927 BRSK1Q8TDC3 778 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 PTCD2Q8WV60 388 aaKnown RBP9.8□□□□□ -0.84
SKA2-208ENST00000583927 GLYATL1Q969I3 302 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 PRR11Q96HE9 360 aaPredicted RBP9.8□□□□□ -0.84
SKA2-208ENST00000583927 SPATA13Q96N96 652 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 TMEM74Q96NL1 305 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 SLC46A1Q96NT5 459 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 DPYSL5Q9BPU6 564 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 GORASP1Q9BQQ3 440 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 DESI2Q9BSY9 194 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 SPATA16Q9BXB7 569 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 FRMD8P1Q9BZ68 369 aaPredicted RBP9.8□□□□□ -0.84
SKA2-208ENST00000583927 B3GNT4Q9C0J1 378 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 ARNT2Q9HBZ2 717 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 ASCL3Q9NQ33 180 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 UBP1Q9NZI7 540 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 RSPH14Q9UHP6 348 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 FEZ2Q9UHY8 353 aaPredicted RBP9.8□□□□□ -0.84
SKA2-208ENST00000583927 SHOC2Q9UQ13 582 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 RAXQ9Y2V3 346 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 TMEM98Q9Y2Y6 226 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 SPO11Q9Y5K1 396 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 RNF215Q9Y6U7 377 aa9.8□□□□□ -0.84
SKA2-208ENST00000583927 A0A1W2PNU3 283 aaPredicted RBP9.79□□□□□ -0.84
SKA2-208ENST00000583927 A6NCN8 305 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 PRR19A6NJB7 356 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 OR5K4A6NMS3 321 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 CDRT15L2A8MXV6 281 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 AURKAO14965 403 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 INPP4BO15327 924 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 GRID2O43424 1007 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 KCNJ13O60928 360 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 ASMTLO95671 621 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 ECEL1O95672 775 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 ATP1A1P05023 1023 aaKnown RBP9.79□□□□□ -0.84
SKA2-208ENST00000583927 RPLP0P05388 317 aaKnown RBP9.79□□□□□ -0.84
SKA2-208ENST00000583927 SLC2A4P14672 509 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 ACTR1BP42025 376 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 ACTR1AP61163 376 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 GABREP78334 506 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 GPLD1P80108 840 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 PDE1BQ01064 536 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 MSLNQ13421 630 aaPredicted RBP9.79□□□□□ -0.84
SKA2-208ENST00000583927 DARS2Q6PI48 645 aaKnown RBP9.79□□□□□ -0.84
SKA2-208ENST00000583927 DOK6Q6PKX4 331 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 SLC30A9Q6PML9 568 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 CLEC14AQ86T13 490 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 SLC35B2Q8TB61 432 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 RTP4Q96DX8 246 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 ATXN7L3BQ96GX2 97 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 TIMM29Q9BSF4 260 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 FSD1LQ9BXM9 530 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 STRADBQ9C0K7 418 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 SARS2Q9NP81 518 aaKnown RBP9.79□□□□□ -0.84
SKA2-208ENST00000583927 IL26Q9NPH9 171 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 THSD1Q9NS62 852 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 SMOXQ9NWM0 555 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 ATXN10Q9UBB4 475 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 TRIM10Q9UDY6 481 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 ZNHIT2Q9UHR6 403 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 ACSL6Q9UKU0 697 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 CAPN6Q9Y6Q1 641 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 SDK2Q58EX2 2172 aa9.79□□□□□ -0.84
SKA2-208ENST00000583927 CACNA1GO43497 2377 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 KIR2DS5A0A0G2JLQ3 304 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 A0A0G2JNG1 304 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 A0A0U1RQJ8 604 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 RHPN2P1A8MT19 583 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 AGAP14A8MT82 685 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 KIR2DS3K7RE56 304 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 KMOO15229 486 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 KCNN4O15554 427 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 RRP8O43159 456 aaKnown RBP9.78□□□□□ -0.84
SKA2-208ENST00000583927 B4GAT1O43505 415 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 CPNE6O95741 557 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 FTCDO95954 541 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 MPOP05164 745 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 ITGA2BP08514 1039 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 F3P13726 295 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 ZNF8P17098 575 aaPredicted RBP9.78□□□□□ -0.84
SKA2-208ENST00000583927 STIP1P31948 543 aaKnown RBP9.78□□□□□ -0.84
SKA2-208ENST00000583927 SPAM1P38567 509 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 CHRNA4P43681 627 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 INHBCP55103 352 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms