RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 hCG_1818297A0A087WSY0 165 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 LIFP15018 202 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 ERCC2P18074 760 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 MPSTP25325 297 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 UGT1A3P35503 534 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 ETV3P41162 512 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 POLD2P49005 469 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 ATP1A2P50993 1020 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 CDK3Q00526 305 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 IL10RBQ08334 325 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 SLC10A7Q0GE19 358 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 RFTN1Q14699 578 aaPredicted RBP20.37■□□□□ 0.85
SRSF1-206ENST00000583741 CLPPQ16740 277 aaPredicted RBP20.37■□□□□ 0.85
SRSF1-206ENST00000583741 DENND2CQ68D51 928 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 BORAQ6PGQ7 559 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 ZNF572Q7Z3I7 529 aaPredicted RBP20.37■□□□□ 0.85
SRSF1-206ENST00000583741 VSIG1Q86XK7 387 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 PTRH1Q86Y79 214 aaKnown RBP20.37■□□□□ 0.85
SRSF1-206ENST00000583741 SPOCK2Q92563 424 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 ART4Q93070 314 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 ADNPQ9H2P0 1102 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 TMEM9Q9P0T7 183 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 PCDHGC4Q9Y5F7 938 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 CTAGE15A4D2H0 777 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 PPM1DO15297 605 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 HEXIM1O94992 359 aaKnown RBP20.37■□□□□ 0.85
SRSF1-206ENST00000583741 SLU7O95391 586 aaKnown RBP20.37■□□□□ 0.85
SRSF1-206ENST00000583741 CTAGE8P0CG41 777 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 THRAP10827 490 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 LHCGRP22888 699 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 GPR3P46089 330 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 CTBSQ01459 385 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 TAZQ16635 292 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 HSD11B1LQ7Z5J1 315 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 CTAGE6Q86UF2 777 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 CTAGE4Q8IX94 777 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 IL22RA1Q8N6P7 574 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 DTD2Q96FN9 168 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 ZNF670Q9BS34 389 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 HEMGNQ9BXL5 484 aa20.37■□□□□ 0.85
SRSF1-206ENST00000583741 IGHV1OR21-1A0A087WYE8 117 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 ZNF487B1APH4 448 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 DAPK3O43293 454 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 HTRA2O43464 458 aaPredicted RBP20.36■□□□□ 0.85
SRSF1-206ENST00000583741 VIPR1P32241 457 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 ADCY8P40145 1251 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 ARL4AP40617 200 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 POLE2P56282 527 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 MMRN1Q13201 1228 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 TRA2AQ13595 282 aaKnown RBP eCLIP20.36■□□□□ 0.855e-10■□□□□ 8.1
SRSF1-206ENST00000583741 PTPRRQ15256 657 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 KAZNQ674X7 775 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 CBARPQ8N350 705 aaPredicted RBP20.36■□□□□ 0.85
SRSF1-206ENST00000583741 OR4D9Q8NGE8 314 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 PDCD6IPQ8WUM4 868 aaKnown RBP20.36■□□□□ 0.85
SRSF1-206ENST00000583741 MAIP1Q8WWC4 291 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 HERPUD2Q9BSE4 406 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 EPN3Q9H201 632 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 OCIAD1Q9NX40 245 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 RCOR3Q9P2K3 495 aaPredicted RBP20.36■□□□□ 0.85
SRSF1-206ENST00000583741 SEPT3Q9UH03 358 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 EFR3BQ9Y2G0 817 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 PLEKHM1Q9Y4G2 1056 aa20.36■□□□□ 0.85
SRSF1-206ENST00000583741 UTP20O75691 2785 aaKnown RBP20.35■□□□□ 0.85
SRSF1-206ENST00000583741 TJP3O95049 919 aa20.35■□□□□ 0.85
SRSF1-206ENST00000583741 KCNAB2Q13303 367 aa20.35■□□□□ 0.85
SRSF1-206ENST00000583741 LBRQ14739 615 aaKnown RBP20.35■□□□□ 0.85
SRSF1-206ENST00000583741 TMCO4Q5TGY1 634 aa20.35■□□□□ 0.85
SRSF1-206ENST00000583741 RFX6Q8HWS3 928 aa20.35■□□□□ 0.85
SRSF1-206ENST00000583741 PGBD5Q8N414 524 aa20.35■□□□□ 0.85
SRSF1-206ENST00000583741 AGBL5Q8NDL9 886 aa20.35■□□□□ 0.85
SRSF1-206ENST00000583741 SPATA4Q8NEY3 305 aa20.35■□□□□ 0.85
SRSF1-206ENST00000583741 DDA1Q9BW61 102 aa20.35■□□□□ 0.85
SRSF1-206ENST00000583741 AP1M1Q9BXS5 423 aa20.35■□□□□ 0.85
SRSF1-206ENST00000583741 SLC17A4Q9Y2C5 497 aa20.35■□□□□ 0.85
SRSF1-206ENST00000583741 USP9YO00507 2555 aaPredicted RBP20.34■□□□□ 0.85
SRSF1-206ENST00000583741 GOLGA6L10A0A0M3HER8 536 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.34■□□□□ 0.85
SRSF1-206ENST00000583741 TCRBV7S2A1N4TA0A589 114 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 GOLGA6CA6NDK9 693 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 GOLGA6BA6NDN3 693 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 NPIPB15A6NHN6 443 aaPredicted RBP20.34■□□□□ 0.85
SRSF1-206ENST00000583741 H3BRJ5 948 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 ZW10O43264 779 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 CPP00450 1065 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 GOLGA6DP0CG33 693 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 CR2P20023 1033 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 IL4RP24394 825 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 RENBPP51606 427 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 ZNF135P52742 658 aaPredicted RBP20.34■□□□□ 0.85
SRSF1-206ENST00000583741 KLF1Q13351 362 aaPredicted RBP20.34■□□□□ 0.85
SRSF1-206ENST00000583741 BIRC2Q13490 618 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 SKIDA1Q1XH10 827 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 ANKRD20A8PQ5CZ79 823 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 RAET1GQ6H3X3 334 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 DOK6Q6PKX4 331 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 Q6ZVL8 140 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 TSPAN33Q86UF1 283 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 CACNA2D3Q8IZS8 1091 aa20.34■□□□□ 0.85
SRSF1-206ENST00000583741 FAF2Q96CS3 445 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms