RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SLC30A9	Q6PML9	568 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	CWC27	Q6UX04	472 aa	Known RBP	4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	CLEC20A	Q6ZU45	233 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	TMEM126B	Q8IUX1	230 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	LIX1L	Q8IVB5	337 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	ARHGAP12	Q8IWW6	846 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	CFAP52	Q8N1V2	620 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	RPRML	Q8N4K4	120 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	RXFP2	Q8WXD0	754 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	BICD1	Q96G01	975 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	NSMCE3	Q96MG7	304 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	AIFM3	Q96NN9	605 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	GBP4	Q96PP9	640 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	HS3ST6	Q96QI5	342 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	YIPF4	Q9BSR8	244 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	TUBB2B	Q9BVA1	445 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	RAB33B	Q9H082	229 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	EML4	Q9HC35	981 aa	Known RBP	4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	PCMTD2	Q9NV79	361 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	PSD3	Q9NYI0	1048 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	VPS54	Q9P1Q0	977 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	STIM2	Q9P246	746 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	B4GALT7	Q9UBV7	327 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	EPHA6	Q9UF33	1036 aa		4.83	□□□□□ -1.64
MSI2-216	ENST00000582772	SLC9B1P1	A6NJY1	282 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772		A8MXQ7	604 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	NPIPA5	E9PKD4	350 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	NEMP1	O14524	444 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	ZBTB43	O43298	467 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	LDB2	O43679	373 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	GPRIN2	O60269	458 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	ACSL4	O60488	711 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	HSP90AA1	P07900	732 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	UMOD	P07911	640 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	PLS3	P13797	630 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	IDE	P14735	1019 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	UQCRC1	P31930	480 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	SLC11A2	P49281	568 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	ATP5J2	P56134	94 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	WNT7B	P56706	349 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	HSF1	Q00613	529 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	CTBS	Q01459	385 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	MS4A13	Q5J8X5	152 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	TMCO4	Q5TGY1	634 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	KRT79	Q5XKE5	535 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	MCTP1	Q6DN14	999 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	CXorf57	Q6NSI4	855 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	ZNF354C	Q86Y25	554 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	KMT5C	Q86Y97	462 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	BLID	Q8IZY5	108 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	DCAF4L2	Q8NA75	395 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	SUN3	Q8TAQ9	357 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	UBXN4	Q92575	508 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	RILPL2	Q969X0	211 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	PTER	Q96BW5	349 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	ZNF501	Q96CX3	271 aa	Predicted RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	LRRC46	Q96FV0	321 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	CELF6	Q96J87	481 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	TMX3	Q96JJ7	454 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	TNIP3	Q96KP6	325 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	PCMTD1	Q96MG8	357 aa	Predicted RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	TRIB1	Q96RU8	372 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	PPP1R9B	Q96SB3	815 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	MED10	Q9BTT4	135 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	RBM4	Q9BWF3	364 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	LSG1	Q9H089	658 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	STN1	Q9H668	368 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	NOL6	Q9H6R4	1146 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	CARS2	Q9HA77	564 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	GRPEL1	Q9HAV7	217 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	ARL15	Q9NXU5	204 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	NOCT	Q9UK39	431 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	NPIPA1	Q9UND3	350 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	MRPS2	Q9Y399	296 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	OR51B4	Q9Y5P0	310 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	ACTL7A	Q9Y615	435 aa		4.82	□□□□□ -1.64
MSI2-216	ENST00000582772	MUC4	Q99102	2169 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772		A0A0G2JNJ9	132 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	GOLGA6L7	A0A1B0GV03	622 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	C16orf96	A6NNT2	1141 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	FAM227A	F5H4B4	570 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	SGSM2	O43147	1006 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	ZNHIT1	O43257	154 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	BUB1	O43683	1085 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	BNIP3L	O60238	219 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	MMP20	O60882	483 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	ZNF821	O75541	412 aa	Predicted RBP	4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	RASSF9	O75901	435 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	CDKL5	O76039	1030 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	MTA2	O94776	668 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	FUCA1	P04066	466 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	CCDC166	P0CW27	439 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	COL6A2	P12110	1019 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	PDGFRA	P16234	1089 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	FDXR	P22570	491 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	MMP11	P24347	488 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	PTGS2	P35354	604 aa		4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	ADD1	P35611	737 aa	Known RBP	4.81	□□□□□ -1.64
MSI2-216	ENST00000582772	CAPZB	P47756	277 aa		4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms