RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TAZQ16635 292 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 TAF1BQ53T94 588 aaPredicted RBP20.73■□□□□ 0.91
CCDC42-203ENST00000581598 BZW1Q7L1Q6 419 aaKnown RBP20.73■□□□□ 0.91
CCDC42-203ENST00000581598 RFX6Q8HWS3 928 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 SFRP1Q8N474 314 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 OR4D9Q8NGE8 314 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 EID2BQ96D98 161 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 CALR3Q96L12 384 aaKnown RBP20.73■□□□□ 0.91
CCDC42-203ENST00000581598 NUDT22Q9BRQ3 303 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 ZFYVE1Q9HBF4 777 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 RAD18Q9NS91 495 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 TRMT1Q9NXH9 659 aaKnown RBP20.73■□□□□ 0.91
CCDC42-203ENST00000581598 IGHV5-10-1A0A0J9YXX1 117 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 ATP1A1P05023 1023 aaKnown RBP20.72■□□□□ 0.91
CCDC42-203ENST00000581598 NR2C2P49116 596 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 CDK18Q07002 472 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 GALNT3Q14435 633 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 TEX44Q53QW1 395 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 ODF2Q5BJF6 829 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.72■□□□□ 0.91
CCDC42-203ENST00000581598 NPNTQ6UXI9 565 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 USP53Q70EK8 1073 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 LYSMD3Q7Z3D4 306 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 TMC3Q7Z5M5 1100 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 C17orf53Q8N3J3 647 aaPredicted RBP20.72■□□□□ 0.91
CCDC42-203ENST00000581598 RNF10Q8N5U6 811 aaKnown RBP20.72■□□□□ 0.91
CCDC42-203ENST00000581598 SLC37A2Q8TED4 501 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 USP7Q93009 1102 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 RNF25Q96BH1 459 aaPredicted RBP20.72■□□□□ 0.91
CCDC42-203ENST00000581598 SRPK1Q96SB4 655 aaKnown RBP20.72■□□□□ 0.91
CCDC42-203ENST00000581598 CARD9Q9H257 536 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 SARS2Q9NP81 518 aaKnown RBP20.72■□□□□ 0.91
CCDC42-203ENST00000581598 LZTFL1Q9NQ48 299 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 ZNHIT2Q9UHR6 403 aa20.72■□□□□ 0.91
CCDC42-203ENST00000581598 PCYT1BQ9Y5K3 369 aaPredicted RBP20.72■□□□□ 0.91
CCDC42-203ENST00000581598 HELZ2Q9BYK8 2649 aaKnown RBP20.71■□□□□ 0.91
CCDC42-203ENST00000581598 PRAMEF33A0A0G2JMD5 474 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 GPR89AB7ZAQ6 455 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 C9orf172C9J069 976 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.71■□□□□ 0.91
CCDC42-203ENST00000581598 PSTPIP1O43586 416 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 NUAK1O60285 661 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 PRAMEF10O60809 474 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 GPR89BP0CG08 455 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 COMTP21964 271 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 CDKN2BP42772 138 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 CLCNKAP51800 687 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 CFHR1Q03591 330 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 TFDP2Q14188 446 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 PRKD1Q15139 912 aaPredicted RBP20.71■□□□□ 0.91
CCDC42-203ENST00000581598 PDPK2PQ6A1A2 396 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 MFSD7Q6UXD7 560 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 DTX1Q86Y01 620 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 ZNF843Q8N446 348 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 CCDC74BQ96LY2 380 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 AGAP3Q96P47 875 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 ZSCAN5AQ9BUG6 496 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 CEP41Q9BYV8 373 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 GLOD4Q9HC38 313 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 KCNK4Q9NYG8 393 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 SEPT10Q9P0V9 454 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 PDP2Q9P2J9 529 aa20.71■□□□□ 0.91
CCDC42-203ENST00000581598 KALRNO60229 2985 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 A6NCN8 305 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 EFSO43281 561 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 SPOPO43791 374 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 THRAP10827 490 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 SLC2A4P14672 509 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 MAPK10P53779 464 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 TMEM164Q5U3C3 297 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 TMEM71Q6P5X7 295 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 CHST15Q7LFX5 561 aaPredicted RBP20.7■□□□□ 0.9
CCDC42-203ENST00000581598 TEKT5Q96M29 485 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 HERPUD2Q9BSE4 406 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 FOXJ2Q9P0K8 574 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 GUCA1BQ9UMX6 200 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 ZNF711Q9Y462 761 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 PCDHGA3Q9Y5H0 932 aa20.7■□□□□ 0.9
CCDC42-203ENST00000581598 MACROD2A1Z1Q3 448 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 ZIC2O95409 532 aaPredicted RBP20.69■□□□□ 0.9
CCDC42-203ENST00000581598 NDST3O95803 873 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 EML2O95834 649 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 PTPN3P26045 913 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 CSF2RBP32927 897 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 TGIF1Q15583 401 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 ZNF569Q5MCW4 686 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 NKAIN2Q5VXU1 208 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 IYDQ6PHW0 289 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 TRAM1L1Q8N609 369 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 AVL9Q8NBF6 648 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 AGBL5Q8NDL9 886 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 GPR26Q8NDV2 337 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 SH3KBP1Q96B97 665 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 TAAR9Q96RI9 348 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 SPATA16Q9BXB7 569 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 STN1Q9H668 368 aaKnown RBP20.69■□□□□ 0.9
CCDC42-203ENST00000581598 TRIM39Q9HCM9 518 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 ATXN10Q9UBB4 475 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 TBC1D29Q9UFV1 150 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 HYOU1Q9Y4L1 999 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms