RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 TTC14Q96N46 770 aa4.46□□□□□ -1.7
SMCHD1-204ENST00000581226 CSTL1Q9H114 145 aa4.46□□□□□ -1.7
SMCHD1-204ENST00000581226 MAGIXQ9H6Y5 334 aa4.46□□□□□ -1.7
SMCHD1-204ENST00000581226 PLEKHA5Q9HAU0 1116 aa4.46□□□□□ -1.7
SMCHD1-204ENST00000581226 MTMR10Q9NXD2 777 aa4.46□□□□□ -1.7
SMCHD1-204ENST00000581226 UBA2Q9UBT2 640 aaPredicted RBP4.46□□□□□ -1.7
SMCHD1-204ENST00000581226 FBXW11Q9UKB1 542 aa4.46□□□□□ -1.7
SMCHD1-204ENST00000581226 SESN1Q9Y6P5 492 aa4.46□□□□□ -1.7
SMCHD1-204ENST00000581226 KANSL1LA0AUZ9 987 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 EIF4E1BA6NMX2 242 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 PTGES3LE9PB15 166 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 ANKRD28O15084 1053 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 GPC4O75487 556 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 HIST1H2ABP04908 130 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 F7P08709 466 aaPredicted RBP4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 CLTBP09497 229 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 ITGA2P17301 1181 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 ANXA7P20073 488 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 HIST1H2ADP20671 130 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 DGKAP23743 735 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 FUT6P51993 359 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 CDH8P55286 799 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 CLDN20P56880 219 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 ISL1P61371 349 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 IKQ13123 557 aaPredicted RBP4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 SYT16Q17RD7 645 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 MYLK3Q32MK0 819 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 ZNF718Q3SXZ3 478 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 HIST3H2AQ7L7L0 130 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 HACE1Q8IYU2 909 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 RFLNBQ8N5W9 214 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 HJURPQ8NCD3 748 aaPredicted RBP4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 BBS10Q8TAM1 723 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 EGLN2Q96KS0 407 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 PKP4Q99569 1192 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 UBA5Q9GZZ9 404 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 EPB41L5Q9HCM4 733 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 BLOC1S4Q9NUP1 217 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 SETD4Q9NVD3 440 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 RALYQ9UKM9 306 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 OR2W1Q9Y3N9 320 aa4.45□□□□□ -1.7
SMCHD1-204ENST00000581226 IFITM10A6NMD0 228 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 A8MZ25 164 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 FAM90A26D6RGX4 464 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 HS6ST1O60243 411 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 DOK2O60496 412 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 LDB3O75112 727 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 OR2C1O95371 312 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 UGT1A1P22309 533 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 TM4SF1P30408 202 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 HADHAP40939 763 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 CAMPP49913 170 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 TROAPQ12815 778 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 GTF2H2Q13888 395 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 PCGF3Q3KNV8 242 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 TMEM35AQ53FP2 167 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 NSUN5P2Q63ZY6 315 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 PMS2CLQ68D20 193 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 JADE1Q6IE81 842 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 GTF2H2CQ6P1K8 395 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 PAPD4Q6PIY7 484 aaKnown RBP4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 CHST9Q7L1S5 443 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 TSPAN33Q86UF1 283 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 CCDC190Q86UF4 302 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 MAP7D3Q8IWC1 876 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 MAB21L3Q8N8X9 362 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 THAP6Q8TBB0 222 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 FEM1CQ96JP0 617 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 OR2A14Q96R47 310 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 SMC6Q96SB8 1091 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 BARD1Q99728 777 aaKnown RBP4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 SYT17Q9BSW7 474 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 PLK3Q9H4B4 646 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 SMARCAD1Q9H4L7 1026 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 DONSONQ9NYP3 566 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 PNMA2Q9UL42 364 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 ARHGEF40Q8TER5 1519 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 CNTNAP2Q9UHC6 1331 aa4.44□□□□□ -1.7
SMCHD1-204ENST00000581226 FSD2A1L4K1 749 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 ASPDHA6ND91 283 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 OGG1O15527 345 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 KRT36O76013 467 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 SRPRAP08240 638 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 ACTN1P12814 892 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 AMD1P17707 334 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 GABRB1P18505 474 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 KCNA5P22460 613 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 AMPHP49418 695 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 NAP1L1P55209 391 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 EEF1A1P68104 462 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 COG7P83436 770 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 SREBF2Q12772 1141 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 ILF3Q12906 894 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 ZNF234Q14588 700 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 MAPRE1Q15691 268 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 ASTE1Q2TB18 679 aaPredicted RBP4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 KRTCAP3Q53RY4 240 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 FAM76BQ5HYJ3 339 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 HYIQ5T013 277 aa4.43□□□□□ -1.7
SMCHD1-204ENST00000581226 EEF1A1P5Q5VTE0 462 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms