RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 DOPEY1Q5JWR5 2465 aa18.89■□□□□ 0.61
NDEL1-209ENST00000580738 ANKRD17O75179 2603 aaKnown RBP18.88■□□□□ 0.61
NDEL1-209ENST00000580738 ESPL1Q14674 2120 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 A0A0J9YYE9 177 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 KIF1CO43896 1103 aaKnown RBP18.88■□□□□ 0.61
NDEL1-209ENST00000580738 PRPSAP2O60256 369 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 SPAG6O75602 509 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 SORBS2O94875 1100 aaKnown RBP18.88■□□□□ 0.61
NDEL1-209ENST00000580738 RECKO95980 971 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 TRBC1P01850 177 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 CCNYL3P0C7X3 344 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 SLC2A4P14672 509 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 ZNF30P17039 623 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 AMPD1P23109 780 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 GARSP41250 739 aaKnown RBP18.88■□□□□ 0.61
NDEL1-209ENST00000580738 MMP13P45452 471 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 CHAF1BQ13112 559 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 IHHQ14623 411 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 KRT31Q15323 416 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 PRR30Q53SZ7 412 aaPredicted RBP18.88■□□□□ 0.61
NDEL1-209ENST00000580738 RALGPS1Q5JS13 557 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 MARC1Q5VT66 337 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 CPZQ66K79 652 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 BBS5Q8N3I7 341 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 ACTL8Q9H568 366 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 ZNF768Q9H5H4 540 aaKnown RBP18.88■□□□□ 0.61
NDEL1-209ENST00000580738 AKIRIN1Q9H9L7 192 aaPredicted RBP18.88■□□□□ 0.61
NDEL1-209ENST00000580738 SHANK1Q9Y566 2161 aa18.88■□□□□ 0.61
NDEL1-209ENST00000580738 GOLGA6L3A6NEY3 463 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 OR5K4A6NMS3 321 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 FADS2P1A8MWK0 482 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 TCP11X1B4DZS4 312 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 RASSF9O75901 435 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 UBXN7O94888 489 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 TIAF1O95411 115 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 CLDN7O95471 211 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 CLDN1O95832 211 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 FGF5P12034 268 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 DCTP40126 519 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 PGDP52209 483 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 MRPL49Q13405 166 aaKnown RBP18.87■□□□□ 0.61
NDEL1-209ENST00000580738 NDUFAF2Q8N183 169 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.87■□□□□ 0.61
NDEL1-209ENST00000580738 NT5MQ9NPB1 228 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 LHX9Q9NQ69 397 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 PARVAQ9NVD7 372 aa18.87■□□□□ 0.61
NDEL1-209ENST00000580738 TMEM191CA6NGB0 347 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 TOX3O15405 576 aaPredicted RBP18.86■□□□□ 0.61
NDEL1-209ENST00000580738 GRID2O43424 1007 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 RNF8O76064 485 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 UBE2HP62256 183 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 RPS18P62269 152 aaKnown RBP18.86■□□□□ 0.61
NDEL1-209ENST00000580738 INPP5JQ15735 1006 aaPredicted RBP18.86■□□□□ 0.61
NDEL1-209ENST00000580738 FKBP15Q5T1M5 1219 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 PLEKHA7Q6IQ23 1121 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 FAM199XQ6PEV8 388 aaPredicted RBP18.86■□□□□ 0.61
NDEL1-209ENST00000580738 TMCO3Q6UWJ1 677 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 TMEM26Q6ZUK4 368 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 MAMDC2Q7Z304 686 aaPredicted RBP18.86■□□□□ 0.61
NDEL1-209ENST00000580738 PHYKPLQ8IUZ5 450 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 PSTKQ8IV42 348 aaKnown RBP18.86■□□□□ 0.61
NDEL1-209ENST00000580738 SLC25A23Q9BV35 468 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 ZWILCHQ9H900 591 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 RMI1Q9H9A7 625 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 UCK1Q9HA47 277 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 ARFGAP3Q9NP61 516 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 MLXIPLQ9NP71 852 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 LUZP4Q9P127 313 aa18.86■□□□□ 0.61
NDEL1-209ENST00000580738 HIVEP3Q5T1R4 2406 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 TMCO5BA8MYB1 307 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 LRCH4O75427 683 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 DDAH2O95865 285 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 AMD1P17707 334 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 XRCC1P18887 633 aaPredicted RBP18.85■□□□□ 0.61
NDEL1-209ENST00000580738 SLC19A1P41440 591 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 CCL11P51671 97 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 ZNF135P52742 658 aaPredicted RBP18.85■□□□□ 0.61
NDEL1-209ENST00000580738 EPHB1P54762 984 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 ITKQ08881 620 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.85■□□□□ 0.61
NDEL1-209ENST00000580738 ZNF648Q5T619 568 aaPredicted RBP18.85■□□□□ 0.61
NDEL1-209ENST00000580738 PPP1R3BQ86XI6 285 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 ATPAF2Q8N5M1 289 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 PRR7Q8TB68 274 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 NSMCE1Q8WV22 266 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 PCMTD1Q96MG8 357 aaPredicted RBP18.85■□□□□ 0.61
NDEL1-209ENST00000580738 BRD8Q9H0E9 1235 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 OSGEPL1Q9H4B0 414 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 CLSTN2Q9H4D0 955 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 KLC4Q9NSK0 619 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 ZNF624Q9P2J8 865 aaPredicted RBP18.85■□□□□ 0.61
NDEL1-209ENST00000580738 ATXN10Q9UBB4 475 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 CHKBQ9Y259 395 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 CSMD1Q96PZ7 3565 aa18.85■□□□□ 0.61
NDEL1-209ENST00000580738 C21orf140B9A014 251 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 H3BRJ5 948 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 NUAK1O60285 661 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 PRLP01236 227 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 VIPP01282 170 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 ZNF8P17098 575 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms