RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 PNCKQ6P2M8 343 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 ADAMTSL4Q6UY14 1074 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 WDR5BQ86VZ2 330 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 ZC3HC1Q86WB0 502 aaKnown RBP10.65□□□□□ -0.7
SS18-213ENST00000579640 PHYKPLQ8IUZ5 450 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 TMEM105Q8N8V8 129 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 DTWD2Q8NBA8 298 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 DDHD1Q8NEL9 900 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 CADM4Q8NFZ8 388 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 LPGAT1Q92604 370 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 GLYATL1Q969I3 302 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 CENPTQ96BT3 561 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 PGM2Q96G03 612 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 COPS8Q99627 209 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 GPR174Q9BXC1 333 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 UGT1A7Q9HAW7 530 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 UGT1A10Q9HAW8 530 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 UGT1A8Q9HAW9 530 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 FBXO6Q9NRD1 293 aaPredicted RBP10.65□□□□□ -0.7
SS18-213ENST00000579640 FBXO4Q9UKT5 387 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 DMTF1Q9Y222 760 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 COMMD10Q9Y6G5 202 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 NUMA1Q14980 2115 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 IGLV3-16A0A075B6K0 115 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 FADS2P1A8MWK0 482 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 F8W8V4 182 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 PRMT5O14744 637 aaPredicted RBP10.65□□□□□ -0.71
SS18-213ENST00000579640 RGS16O15492 202 aaPredicted RBP10.65□□□□□ -0.71
SS18-213ENST00000579640 FAM155BO75949 473 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 HAUS5O94927 633 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 SOD1P00441 154 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 ITGA2BP08514 1039 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 TDGF1P13385 188 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 HNRNPA2B1P22626 353 aaKnown RBP10.65□□□□□ -0.71
SS18-213ENST00000579640 RPS3P23396 243 aaKnown RBP eCLIP10.65□□□□□ -0.71
SS18-213ENST00000579640 GABRB3P28472 473 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 MAT2AP31153 395 aaKnown RBP10.65□□□□□ -0.71
SS18-213ENST00000579640 NSG1P42857 185 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 PXNP49023 591 aaPredicted RBP10.65□□□□□ -0.71
SS18-213ENST00000579640 IRF4Q15306 451 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 TMED2Q15363 201 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 TMEM31Q5JXX7 168 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 GPRC6AQ5T6X5 926 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 LDB1Q86U70 411 aaPredicted RBP10.65□□□□□ -0.71
SS18-213ENST00000579640 C11orf74Q86VG3 221 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 RLN3Q8WXF3 142 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 VPS39Q96JC1 886 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 KLF6Q99612 283 aaPredicted RBP10.65□□□□□ -0.71
SS18-213ENST00000579640 GPR22Q99680 433 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 SH3GL2Q99962 352 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 FAM126AQ9BYI3 521 aaPredicted RBP10.65□□□□□ -0.71
SS18-213ENST00000579640 ZCCHC2Q9C0B9 1178 aaKnown RBP10.65□□□□□ -0.71
SS18-213ENST00000579640 CCDC68Q9H2F9 335 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 C6orf106Q9H6K1 298 aaPredicted RBP10.65□□□□□ -0.71
SS18-213ENST00000579640 TMBIM4Q9HC24 238 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 PCDHB1Q9Y5F3 818 aa10.65□□□□□ -0.71
SS18-213ENST00000579640 PLXNB3Q9ULL4 1909 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 H3BMM5 538 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 TOR1BO14657 336 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 SLC31A1O15431 190 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 GPR39O43194 453 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 SLC25A14O95258 325 aaPredicted RBP10.64□□□□□ -0.71
SS18-213ENST00000579640 ESR1P03372 595 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 PCCBP05166 539 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 AKT2P31751 481 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 TRIM23P36406 574 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 AGBL2Q5U5Z8 902 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 CNSTQ6PJW8 725 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 MICALCLQ6ZW33 695 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 LONP2Q86WA8 852 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 GDAP1Q8TB36 358 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 FAM174AQ8TBP5 190 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 KLK6Q92876 244 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 DCUN1D1Q96GG9 259 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 HIC2Q96JB3 615 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 CLPBQ9H078 707 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 CTNNAL1Q9UBT7 734 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 TBK1Q9UHD2 729 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 TMPRSS11EQ9UL52 423 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 CNOT6Q9ULM6 557 aaKnown RBP10.64□□□□□ -0.71
SS18-213ENST00000579640 HS3ST3A1Q9Y663 406 aa10.64□□□□□ -0.71
SS18-213ENST00000579640 FAM95CA0A1B0GW59 222 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 UBA6A0AVT1 1052 aaPredicted RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 METTL12A8MUP2 240 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 PRAMEF26H0Y7S4 382 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 K7ESM1 405 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 TNFRSF10AO00220 468 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 QSOX1O00391 747 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 FPGTO14772 594 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 AP2A2O94973 939 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 FSBPO95073 299 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 IGHV4-34P06331 123 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 HOXC4P09017 264 aaPredicted RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 KRT15P19012 456 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 MSH3P20585 1137 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 AKT1P31749 480 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 CA5AP35218 305 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 POU4F1Q01851 419 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 HSP90B2PQ58FF3 399 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 ZNF789Q5FWF6 425 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms