RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 GRIA1P42261 906 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 MAPK8P45983 427 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ATP5OP48047 213 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 GRIA4P48058 902 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 FNTAP49354 379 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SCNN1BP51168 640 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CCR5P51681 352 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 STC1P52823 247 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 WNT3AP56704 352 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 RPL26P61254 145 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SEMG2Q02383 582 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 BCL2L1Q07817 233 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 MPP3Q13368 585 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SNX1Q13596 522 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 PTK6Q13882 451 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 GALNT3Q14435 633 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 NAA30Q147X3 362 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 GRM3Q14832 879 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CNGA3Q16281 694 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 LONRF2Q1L5Z9 754 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 PARP6Q2NL67 630 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SIRPB2Q5JXA9 342 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SPDYCQ5MJ68 293 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ZFYVE27Q5T4F4 411 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 FAXCQ5TGI0 409 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ANKRD22Q5VYY1 191 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SEL1L3Q68CR1 1132 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 KIAA0895LQ68EN5 471 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SDE2Q6IQ49 451 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 NEK5Q6P3R8 708 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 BRAT1Q6PJG6 821 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CRTC1Q6UUV9 634 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 LIPIQ6XZB0 460 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 GCNT7Q6ZNI0 430 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 BZW1Q7L1Q6 419 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ASCL5Q7RTU5 278 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 KANSL1Q7Z3B3 1105 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 HSD11B1LQ7Z5J1 315 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 TECPR1Q7Z6L1 1165 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ABI3BPQ7Z7G0 1075 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 DSG4Q86SJ6 1040 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 HORMAD1Q86X24 394 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC22A18ASQ8N1D0 253 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 NAT8LQ8N9F0 302 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 TP53I13Q8NBR0 393 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CCNYQ8ND76 341 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SPATA4Q8NEY3 305 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CADM4Q8NFZ8 388 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 OR2T34Q8NGX1 318 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SEC14L1Q92503 715 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CPT1BQ92523 772 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ISL2Q96A47 359 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 RAB7BQ96AH8 199 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CENPTQ96BT3 561 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SCRN2Q96FV2 425 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 FEM1CQ96JP0 617 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SIGLEC10Q96LC7 697 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 BMFQ96LC9 184 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CCDC114Q96M63 670 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 PRRX2Q99811 253 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SGPP1Q9BX95 441 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 GPR174Q9BXC1 333 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 MAK16Q9BXY0 300 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF552Q9H707 407 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 ATP13A3Q9H7F0 1226 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 L2HGDHQ9H9P8 463 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SGK2Q9HBY8 427 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 PCDH9Q9HC56 1237 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CAPN10Q9HC96 672 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 PREBQ9HCU5 417 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 PCDH12Q9NPG4 1184 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CASS4Q9NQ75 786 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 EIF2B3Q9NR50 452 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 VPS45Q9NRW7 570 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 GRHL1Q9NZI5 618 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 UBP1Q9NZI7 540 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 B4GALT6Q9UBX8 382 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CDC23Q9UJX2 597 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 PILRBQ9UKJ0 227 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 TMPRSS11EQ9UL52 423 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 RPL26L1Q9UNX3 145 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 CHKBQ9Y259 395 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 SAR1BQ9Y6B6 198 aa3.79□□□□□ -1.8
SMARCE1-215ENST00000578995 UNC13CQ8NB66 2214 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 ATXN2Q99700 1313 aaKnown RBP3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 A0A1W2PPC4 97 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 A0A1W2PQ67 120 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 A0A1W2PQU0 124 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 PRR23AA6NEV1 266 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 POM121BA6NF01 834 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 MROH6A6NGR9 719 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 AGAP14A8MT82 685 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 FADS2P1A8MWK0 482 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 PATE3B3GLJ2 98 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 H0Y8X5 98 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 CCDC188H7C350 402 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 PSMD11O00231 422 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 TSPAN6O43657 245 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms