RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-210	ENST00000578733	DUOXA1	Q1HG43	343 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ATP13A5	Q4VNC0	1218 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	RNF187	Q5TA31	235 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	STEAP4	Q687X5	459 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ZNF449	Q6P9G9	518 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	EMB	Q6PCB8	327 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CES3	Q6UWW8	571 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	UNC5A	Q6ZN44	842 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GCNT7	Q6ZNI0	430 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ABI3BP	Q7Z7G0	1075 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	KCNMB4	Q86W47	210 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	HEATR4	Q86WZ0	1026 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	OXR1	Q8N573	874 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	MYRIP	Q8NFW9	859 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	BTN2A2	Q8WVV5	523 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GLYATL1	Q969I3	302 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CERS2	Q96G23	380 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	C9orf72	Q96LT7	481 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	WDR92	Q96MX6	357 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	APOO	Q9BUR5	198 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TEX101	Q9BY14	249 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PARD6B	Q9BYG5	372 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	VPS37B	Q9H9H4	285 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	EBF2	Q9HAK2	575 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TM9SF3	Q9HD45	589 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	MBNL1	Q9NR56	388 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ZFAT	Q9P243	1243 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SLC2A6	Q9UGQ3	507 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PILRB	Q9UKJ0	227 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NCOR2	Q9Y618	2525 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ATXN2	Q99700	1313 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ZCWPW2	A0A1B0GU75	182 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GPR89A	B7ZAQ6	455 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CCL22	O00626	93 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	RAD51B	O15315	384 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	INPP4B	O15327	924 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	VEGFD	O43915	354 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ASMTL	O95671	621 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	RET	P07949	1114 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GPR89B	P0CG08	455 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ZNF7	P17097	686 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	OGN	P20774	298 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	MAOB	P27338	520 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	AKT1	P31749	480 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	BLK	P51451	505 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PMS2	P54278	862 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CLDN2	P57739	230 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	VSNL1	P62760	191 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CDK3	Q00526	305 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PDE1C	Q14123	709 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ITIH4	Q14624	930 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NFATC4	Q14934	902 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	FASTKD3	Q14CZ7	662 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NEPRO	Q6NW34	567 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733		Q6ZSR6	202 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	RFLNA	Q6ZTI6	216 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	C3orf62	Q6ZUJ4	267 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CNPY4	Q8N129	248 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NXPE1	Q8N323	547 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GPR150	Q8NGU9	434 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ZNF514	Q96K75	400 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	BMF	Q96LC9	184 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ZNF778	Q96MU6	729 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TCF12	Q99081	682 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	COPS8	Q99627	209 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ORAI3	Q9BRQ5	295 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NUSAP1	Q9BXS6	441 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TRIM39	Q9HCM9	518 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ZDHHC3	Q9NYG2	299 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TXNDC16	Q9P2K2	825 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	OR1A2	Q9Y585	309 aa		11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	OTOGL	Q3ZCN5	2332 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	POM121B	A6NF01	834 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	AGAP14	A8MT82	685 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	FADS2P1	A8MWK0	482 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733		H3BM21	787 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733		K7ESM1	405 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TLR4	O00206	839 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	VILL	O15195	856 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NDUFS3	O75489	264 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SYP	P08247	313 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ACRV1	P26436	265 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	FOXN2	P32314	431 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NSG1	P42857	185 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ARSD	P51689	593 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PFN3	P60673	137 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	MGAT5	Q09328	741 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NAB1	Q13506	487 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	BRD3	Q15059	726 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	LPAL2	Q16609	132 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	KYNU	Q16719	465 aa		11.17	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	HSP90AA5P	Q58FG0	334 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms