RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 TEX26Q8N6G2 289 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 NETO2Q8NC67 525 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 HJURPQ8NCD3 748 aaPredicted RBP14.01□□□□□ -0.17
SREBF1-217ENST00000577897 IPMKQ8NFU5 416 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 MGARPQ8TDB4 240 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 ZNF473Q8WTR7 871 aaKnown RBP14.01□□□□□ -0.17
SREBF1-217ENST00000577897 CKAP2Q8WWK9 683 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 ZNF669Q96BR6 464 aaPredicted RBP14.01□□□□□ -0.17
SREBF1-217ENST00000577897 CERS2Q96G23 380 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 APOPT1Q96IL0 206 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 SERAC1Q96JX3 654 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 DEPDC7Q96QD5 511 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 PAIP2Q9BPZ3 127 aaKnown RBP14.01□□□□□ -0.17
SREBF1-217ENST00000577897 WDR83Q9BRX9 315 aaKnown RBP14.01□□□□□ -0.17
SREBF1-217ENST00000577897 POLR1BQ9H9Y6 1135 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 FBRSQ9HAH7 460 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 NT5MQ9NPB1 228 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 SYBUQ9NX95 663 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 FBXL12Q9NXK8 326 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 SERGEFQ9UGK8 458 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 SEPT3Q9UH03 358 aa14.01□□□□□ -0.17
SREBF1-217ENST00000577897 AGO1Q9UL18 857 aaKnown RBP14.01□□□□□ -0.17
SREBF1-217ENST00000577897 A0A1W2PP55 124 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 TRIM49D1C9J1S8 452 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 TLR4O00206 839 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 SIGLEC6O43699 453 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 PRAMEF11O60813 436 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 DXOO77932 396 aaKnown RBP14□□□□□ -0.17
SREBF1-217ENST00000577897 HLA-DQB2P05538 268 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 NEFHP12036 1026 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 MYF5P13349 255 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 ADRA1DP25100 572 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 GP5P40197 560 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 LSSP48449 732 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 POLD2P49005 469 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 ANKRD20A4Q4UJ75 823 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 ATG14Q6ZNE5 492 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 TIFABQ6ZNK6 161 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 TMEM135Q86UB9 458 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 CACNA2D3Q8IZS8 1091 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 OXR1Q8N573 874 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 ZNF557Q8N988 423 aaPredicted RBP14□□□□□ -0.17
SREBF1-217ENST00000577897 CALML6Q8TD86 181 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 LRRC8CQ8TDW0 803 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 IFT43Q96FT9 208 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 IMP4Q96G21 291 aaKnown RBP14□□□□□ -0.17
SREBF1-217ENST00000577897 MLPHQ9BV36 600 aaPredicted RBP14□□□□□ -0.17
SREBF1-217ENST00000577897 FICDQ9BVA6 458 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 SLC2A11Q9BYW1 496 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 MTG2Q9H4K7 406 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 ASCL3Q9NQ33 180 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 STOML2Q9UJZ1 356 aa14□□□□□ -0.17
SREBF1-217ENST00000577897 HEATR9A2RTY3 570 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 LRRC72A6NJI9 287 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 KDELR3O43731 214 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 ATP9BO43861 1147 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 CSO75390 466 aaKnown RBP13.99□□□□□ -0.17
SREBF1-217ENST00000577897 RNASEH2AO75792 299 aaKnown RBP13.99□□□□□ -0.17
SREBF1-217ENST00000577897 CNTN5O94779 1100 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 EPOP01588 193 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 HLA-FP30511 346 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 GRIA1P42261 906 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 CSE1LP55060 971 aaKnown RBP13.99□□□□□ -0.17
SREBF1-217ENST00000577897 PDE1BQ01064 536 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 SLC18A2Q05940 514 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 EFTUD2Q15029 972 aaKnown RBP eCLIP13.99□□□□□ -0.171e-14■■■■■ 28.2
SREBF1-217ENST00000577897 C3orf38Q5JPI3 329 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 NADSYN1Q6IA69 706 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 ARHGAP36Q6ZRI8 547 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 KANSL1Q7Z3B3 1105 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 C4orf33Q8N1A6 199 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 MPP5Q8N3R9 675 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 CNTD1Q8N815 330 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 EXD3Q8N9H8 876 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 SREK1Q8WXA9 508 aaKnown RBP13.99□□□□□ -0.17
SREBF1-217ENST00000577897 TSNARE1Q96NA8 513 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 KIFC1Q9BW19 673 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 CINPQ9BW66 212 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-217ENST00000577897 MUC3BQ9H195 1237 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 NOL6Q9H6R4 1146 aaKnown RBP13.99□□□□□ -0.17
SREBF1-217ENST00000577897 ABCB8Q9NUT2 735 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 NDFIP2Q9NV92 336 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 MKS1Q9NXB0 559 aa13.99□□□□□ -0.17
SREBF1-217ENST00000577897 UBA2Q9UBT2 640 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-217ENST00000577897 SPTBN1Q01082 2364 aaKnown RBP13.98□□□□□ -0.17
SREBF1-217ENST00000577897 TRIM38O00635 465 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 MID1O15344 667 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 TYROBPO43914 113 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 SPAG7O75391 227 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 PMPCBO75439 489 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 HLA-DPA1P20036 260 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 RXRGP48443 463 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 SERPINH1P50454 418 aaKnown RBP13.98□□□□□ -0.17
SREBF1-217ENST00000577897 WNT3AP56704 352 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 NIPAL4Q0D2K0 466 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 THOC5Q13769 683 aaKnown RBP13.98□□□□□ -0.17
SREBF1-217ENST00000577897 DBN1Q16643 649 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 FAM133BQ5BKY9 247 aaKnown RBP13.98□□□□□ -0.17
SREBF1-217ENST00000577897 RALGPS1Q5JS13 557 aa13.98□□□□□ -0.17
SREBF1-217ENST00000577897 USP30Q70CQ3 517 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms