RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 MAMDC2Q7Z304 686 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 SRRM1Q8IYB3 904 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 MCOLN2Q8IZK6 566 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 TCTN2Q96GX1 697 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 WDR24Q96S15 920 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 AGPAT1Q99943 283 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 MGME1Q9BQP7 344 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 HERPUD2Q9BSE4 406 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 SLC25A23Q9BV35 468 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 MFRPQ9BY79 579 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 ARFGAP3Q9NP61 516 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 MLXIPLQ9NP71 852 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 MAP10Q9P2G4 905 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 ERRFI1Q9UJM3 462 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 PCDHGA6Q9Y5G7 932 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 MN1Q10571 1320 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 LRBAP50851 2863 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 KIR2DS5A0A0G2JLQ3 304 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 A0A0G2JNG1 304 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 A0A0J9YYE9 177 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 WIPF3A6NGB9 483 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 OR5K4A6NMS3 321 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 FADS2P1A8MWK0 482 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 TMCO5BA8MYB1 307 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 KIR2DS3K7RE56 304 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 GRID2O43424 1007 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 MAFKO60675 156 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 RASSF9O75901 435 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 UBXN7O94888 489 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 DDAH2O95865 285 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 RECKO95980 971 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 TRBC1P01850 177 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 MIPP30301 263 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 HSPA9P38646 679 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 GARSP41250 739 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 SLC19A1P41440 591 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 PGDP52209 483 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 STC1P52823 247 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 UBE2IP63279 158 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 ITKQ08881 620 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 MAMLD1Q13495 774 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 DPYSQ14117 519 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 KIR2DS5Q14953 304 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 SYCP1Q15431 976 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 MARC1Q5VT66 337 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 FAM92BQ6ZTR7 304 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 TMEM26Q6ZUK4 368 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 CYP4V2Q6ZWL3 525 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 NDUFAF2Q8N183 169 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 Q8NA96 180 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 C19orf60Q96EN9 201 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 TRIM7Q9C029 511 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 ING2Q9H160 280 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 EPB41L1Q9H4G0 881 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 ACTL8Q9H568 366 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 ZNF768Q9H5H4 540 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 NT5MQ9NPB1 228 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 ACSS2Q9NR19 701 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 KLC4Q9NSK0 619 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 TAS2R14Q9NYV8 317 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 ZNF624Q9P2J8 865 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 SIK3Q9Y2K2 1263 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 HIVEP3Q5T1R4 2406 aa9.98□□□□□ -0.81
NPLOC4-220ENST00000576940 GOLGA6L3A6NEY3 463 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 LILRA5A6NI73 299 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 EIF3CLB5ME19 914 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 TOX3O15405 576 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 ATMINO43313 823 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 KRT86O43790 486 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 NUAK1O60285 661 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 VIPP01282 170 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 PYGLP06737 847 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 ZNF8P17098 575 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 DESP17661 470 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 XRCC1P18887 633 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 EEF1GP26641 437 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 MMP13P45452 471 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 HCAR3P49019 387 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 UGT8Q16880 541 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 CACHD1Q5VU97 1274 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 PWWP2BQ6NUJ5 590 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 JMJD6Q6NYC1 403 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 ZNF765Q7L2R6 523 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 PPP1R3BQ86XI6 285 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 BBS5Q8N3I7 341 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 KLHL6Q8WZ60 621 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 RSC1A1Q92681 617 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 EIF3CQ99613 913 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 SLAMF7Q9NQ25 335 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 DTLQ9NZJ0 730 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 VPS18Q9P253 973 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 ATXN10Q9UBB4 475 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 SLC23A2Q9UGH3 650 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 CHKBQ9Y259 395 aa9.97□□□□□ -0.81
NPLOC4-220ENST00000576940 TMEM191CA6NGB0 347 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 C21orf140B9A014 251 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 PRPSAP2O60256 369 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 LDLRP01130 860 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 PRLP01236 227 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms