RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 NELL1Q92832 810 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 DMRTB1Q96MA1 342 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 GPR22Q99680 433 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 CRISPLD1Q9H336 500 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 SP140LQ9H930 580 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 ING4Q9UNL4 249 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 MYH11P35749 1972 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 NPEPPSL1A6NEC2 478 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CCL22O00626 93 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 ABCB7O75027 752 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 EFCAB14O75071 495 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 C8BP07358 591 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 PABPC1P11940 636 aaKnown RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CDH1P12830 882 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CD36P16671 472 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 IMPDH1P20839 514 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CCNCP24863 283 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 GSTM5P46439 218 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZSWIM7Q19AV6 140 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 LGI2Q8N0V4 545 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 LRRC17Q8N6Y2 441 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CLEC4CQ8WTT0 213 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 GTF3C2Q8WUA4 911 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 TMBIM1Q969X1 311 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 FAM124BQ9H5Z6 455 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 ATP6V1HQ9UI12 483 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CDC14AQ9UNH5 594 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 SUV39H1O43463 412 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 LRATO95237 230 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 POMCP01189 267 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 AZGP1P25311 298 aaKnown RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 GCAP28676 217 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 GNPDA1P46926 289 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 TMBIM6P55061 237 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 HNRNPDQ14103 355 aaKnown RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 KIAA0930Q6ICG6 404 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 FAM35AQ86V20 835 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 NAT16Q8N8M0 369 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 PHF10Q8WUB8 498 aaKnown RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 TMIGD2Q96BF3 282 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZYG11BQ9C0D3 744 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 GPR182O15218 404 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CYP7B1O75881 506 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 IRF8Q02556 426 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 GALNT3Q14435 633 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 C11orf96Q7Z7L8 435 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 TTC29Q8NA56 475 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 EMID1Q96A84 441 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 HBEGFQ99075 208 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 GAD1Q99259 594 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 TOR4AQ9NXH8 423 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CNTN3Q9P232 1028 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 AHSGP02765 367 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 PRKAR1AP10644 381 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 ITGA2P17301 1181 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CTSKP43235 329 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CPT1AP50416 773 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 ANXA11P50995 505 aaKnown RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 KPNA1P52294 538 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 SPIBQ01892 262 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 BOP1Q14137 746 aaKnown RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 NPTX1Q15818 432 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 TSTD2Q5T7W7 516 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 PPP4R4Q6NUP7 873 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 NEK5Q6P3R8 708 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 MZT2AQ6P582 158 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CARNMT1Q8N4J0 409 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 OR5K1Q8NHB7 308 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 TSSK3Q96PN8 268 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 GMIPQ9P107 970 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 TRPC4Q9UBN4 977 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 CNOT11Q9UKZ1 510 aaKnown RBP13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 SH3BP1Q9Y3L3 701 aa13.04□□□□□ -0.32
PCDHGB3-201ENST00000576222 FAM240BA0A1B0GVZ2 78 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 FMO3P31513 532 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 CDH5P33151 784 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 HPCAL1P37235 193 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 SCN1BQ07699 218 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 RAB42Q8N4Z0 105 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 PIK3R3Q92569 461 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZUFSPQ96AP4 578 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 ABCG8Q9H221 673 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 PAGE1O75459 146 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 OR2B6P58173 313 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 GNASQ5JWF2 1037 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 RAP1GAP2Q684P5 730 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 RIOX2Q8IUF8 465 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 TRUB1Q8WWH5 349 aaKnown RBP13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 HAPLN3Q96S86 360 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 NXF3Q9H4D5 531 aaKnown RBP13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 BPIFA1Q9NP55 256 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 MOCS1Q9NZB8 636 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 PTCH2Q9Y6C5 1203 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 CXCR6O00574 342 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 IL7RP16871 459 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms