RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ZSCAN5AQ9BUG6 496 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 CDH19Q9H159 772 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 TRABDQ9H4I3 376 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 BPIFA1Q9NP55 256 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 SMARCAL1Q9NZC9 954 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 TAAR2Q9P1P5 351 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 PRKAB1Q9Y478 270 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 RNF215Q9Y6U7 377 aa8.59□□□□□ -1.03
SMG6-216ENST00000575176 AHCTF1Q8WYP5 2266 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 IGLV3-16A0A075B6K0 115 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 TRBV5-4A0A0C4DH59 114 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 B4DGG1 531 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 D6RAR5 112 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 H7C0S8 307 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 CCL22O00626 93 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 ANXA9O76027 345 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 TNFP01375 233 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 PYGLP06737 847 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 ANXA6P08133 673 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 ZSCAN5DPP0CG00 497 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 PRSS56P0CW18 603 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 ALPPL2P10696 532 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 BRAFP15056 766 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 CXCR5P32302 372 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 TARDBPQ13148 414 aaKnown RBP eCLIP8.58□□□□□ -1.04
SMG6-216ENST00000575176 RTP5Q14D33 572 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 RPS6KA1Q15418 735 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 NR0B2Q15466 257 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 TAF1AQ15573 450 aaPredicted RBP8.58□□□□□ -1.04
SMG6-216ENST00000575176 CHRNA6Q15825 494 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 CYP1B1Q16678 543 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 PARP6Q2NL67 630 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 C14orf28Q4W4Y0 310 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 ZNF569Q5MCW4 686 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.58□□□□□ -1.04
SMG6-216ENST00000575176 SEL1L2Q5TEA6 688 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 RD3Q7Z3Z2 195 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 GLT6D1Q7Z4J2 308 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 SPRED1Q7Z699 444 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 PROSER1Q86XN7 944 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 GKN2Q86XP6 184 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 SLITRK4Q8IW52 837 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 NDUFAF2Q8N183 169 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 SLC35F6Q8N357 371 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 GALNT15Q8N3T1 639 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 SFRP1Q8N474 314 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 PDCD7Q8N8D1 485 aaKnown RBP8.58□□□□□ -1.04
SMG6-216ENST00000575176 OR13J1Q8NGT2 312 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 ATL2Q8NHH9 583 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 BLOC1S5Q8TDH9 187 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 COG1Q8WTW3 980 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 NAT14Q8WUY8 206 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 TBL1YQ9BQ87 522 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 CCDC3Q9BQI4 270 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 FRMD8P1Q9BZ68 369 aaPredicted RBP8.58□□□□□ -1.04
SMG6-216ENST00000575176 ASCL3Q9NQ33 180 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 PIH1D1Q9NWS0 290 aaKnown RBP8.58□□□□□ -1.04
SMG6-216ENST00000575176 HACD3Q9P035 362 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 SCHIP1Q9P0W5 487 aaPredicted RBP8.58□□□□□ -1.04
SMG6-216ENST00000575176 SIRPGQ9P1W8 387 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 TBC1D29Q9UFV1 150 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 FKBPLQ9UIM3 349 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 APPL1Q9UKG1 709 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 TTC7AQ9ULT0 858 aaPredicted RBP8.58□□□□□ -1.04
SMG6-216ENST00000575176 GPR34Q9UPC5 381 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 ENTPD2Q9Y5L3 495 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 CACNA1GO43497 2377 aa8.58□□□□□ -1.04
SMG6-216ENST00000575176 FER1L5A0AVI2 2057 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 GOLGA6CA6NDK9 693 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 GOLGA6BA6NDN3 693 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 MROH6A6NGR9 719 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 PPM1DO15297 605 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 TLX3O43711 291 aaPredicted RBP8.57□□□□□ -1.04
SMG6-216ENST00000575176 NUDT21O43809 227 aaKnown RBP8.57□□□□□ -1.04
SMG6-216ENST00000575176 UGT1A9O60656 530 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 PRAMEF1O95521 474 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 ECEL1O95672 775 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 MT-CO3P00414 261 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 FGGP02679 453 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 GOLGA6DP0CG33 693 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 CDK4P11802 303 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 UGT1A6P19224 532 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 UGT1A1P22309 533 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 UGT1A4P22310 534 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 RPL22P35268 128 aaKnown RBP8.57□□□□□ -1.04
SMG6-216ENST00000575176 UGT1A3P35503 534 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 UGT1A5P35504 534 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 SPAM1P38567 509 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 FASLGP48023 281 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 ARSDP51689 593 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 CLCNKAP51800 687 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 UBE2IP63279 158 aaKnown RBP8.57□□□□□ -1.04
SMG6-216ENST00000575176 DAB2P98082 770 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 ACVR1Q04771 509 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 LRP8Q14114 963 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 CCNG2Q16589 344 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 ISXQ2M1V0 245 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 CCDC181Q5TID7 509 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 SLC30A9Q6PML9 568 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 FAM151BQ6UXP7 276 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms