RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 UGT1A7Q9HAW7 530 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 UGT1A10Q9HAW8 530 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 UGT1A8Q9HAW9 530 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 VPS18Q9P253 973 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 NCDNQ9UBB6 729 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.94■□□□□ 0.3
NUP88-210ENST00000574867 ANKRD6Q9Y2G4 727 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 V9GYY5 206 aaPredicted RBP16.94■□□□□ 0.3
NUP88-210ENST00000574867 CACNA1EQ15878 2313 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 A0A1B0GVT2 93 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 OR51F1A6NGY5 319 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 GPR39O43194 453 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 GSTA2P09210 222 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 SLMAPQ14BN4 828 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 ERCC6LQ2NKX8 1250 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 LYPLAL1Q5VWZ2 237 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 WDR93Q6P2C0 686 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 CERS6Q6ZMG9 384 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 PARGQ86W56 976 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 PALM2Q8IXS6 379 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 GSDMBQ8TAX9 411 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 GDAP1Q8TB36 358 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 HEXDCQ8WVB3 486 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 NUSAP1Q9BXS6 441 aaKnown RBP16.93■□□□□ 0.3
NUP88-210ENST00000574867 ZDHHC5Q9C0B5 715 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 PI4KAP42356 2102 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 GPR89AB7ZAQ6 455 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 TNFRSF10CO14798 259 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 KHNYNO15037 678 aaKnown RBP16.93■□□□□ 0.3
NUP88-210ENST00000574867 SPAG6O75602 509 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 GPR89BP0CG08 455 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 ACRV1P26436 265 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 PPARGP37231 505 aaPredicted RBP16.93■□□□□ 0.3
NUP88-210ENST00000574867 GPRC6AQ5T6X5 926 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 MRNIPQ6NTE8 343 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 PSAPL1Q6NUJ1 521 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 IL27RAQ6UWB1 636 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 TAS2R42Q7RTR8 314 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 OR56A4Q8NGH8 313 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 CALML6Q8TD86 181 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 SCG3Q8WXD2 468 aaKnown RBP16.93■□□□□ 0.3
NUP88-210ENST00000574867 FAM167BQ9BTA0 163 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 ERVMER34-1Q9H9K5 563 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 C20orf96Q9NUD7 363 aaPredicted RBP16.93■□□□□ 0.3
NUP88-210ENST00000574867 TMPRSS11EQ9UL52 423 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 PCDH15Q96QU1 1955 aa16.93■□□□□ 0.3
NUP88-210ENST00000574867 CD3EAPO15446 510 aaKnown RBP16.92■□□□□ 0.3
NUP88-210ENST00000574867 TUBBP07437 444 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 SYPP08247 313 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 CTSKP43235 329 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 THOC5Q13769 683 aaKnown RBP16.92■□□□□ 0.3
NUP88-210ENST00000574867 TPRG1LQ5T0D9 272 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 KCNMB4Q86W47 210 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 OXR1Q8N573 874 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 GPR150Q8NGU9 434 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 CERS2Q96G23 380 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 TTC25Q96NG3 672 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 COPS8Q99627 209 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 PLAC1Q9HBJ0 212 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 TRIM39Q9HCM9 518 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 SLC17A4Q9Y2C5 497 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 PATE3B3GLJ2 98 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 CFAP99D6REC4 459 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 PFDN6O15212 129 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 VEGFDO43915 354 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 OGNP20774 298 aaKnown RBP16.92■□□□□ 0.3
NUP88-210ENST00000574867 TTPAP49638 278 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 GRIK2Q13002 908 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 FZD2Q14332 565 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 ITIH4Q14624 930 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 NEPROQ6NW34 567 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 TRIM74Q86UV6 250 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 SERPINA9Q86WD7 417 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 SPATS2Q86XZ4 545 aaKnown RBP16.92■□□□□ 0.3
NUP88-210ENST00000574867 PIANPQ8IYJ0 282 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 OTUD6BQ8N6M0 293 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 C9orf72Q96LT7 481 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 FAM96AQ9H5X1 160 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 ZDHHC3Q9NYG2 299 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 KLQ9UEF7 1012 aa16.92■□□□□ 0.3
NUP88-210ENST00000574867 LRP4O75096 1905 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 GPR179Q6PRD1 2367 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 TMEM202A6NGA9 273 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 ZNF806P0C7X5 589 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 RALBP11234 206 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 MSH3P20585 1137 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 AKT1P31749 480 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 CDKN1CP49918 316 aaPredicted RBP16.91■□□□□ 0.3
NUP88-210ENST00000574867 VSNL1P62760 191 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 KIF19Q2TAC6 998 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 RNF187Q5TA31 235 aaPredicted RBP16.91■□□□□ 0.3
NUP88-210ENST00000574867 ZNF449Q6P9G9 518 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 ENPP7Q6UWV6 458 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 SDCCAG8Q86SQ7 713 aaPredicted RBP16.91■□□□□ 0.3
NUP88-210ENST00000574867 RMI1Q9H9A7 625 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.91■□□□□ 0.3
NUP88-210ENST00000574867 OAS3Q9Y6K5 1087 aaKnown RBP16.91■□□□□ 0.3
NUP88-210ENST00000574867 RALGAPA1Q6GYQ0 2036 aa16.91■□□□□ 0.3
NUP88-210ENST00000574867 VPS13AQ96RL7 3174 aa16.9■□□□□ 0.3
NUP88-210ENST00000574867 USP34Q70CQ2 3546 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms