RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 MGAQ8IWI9 3026 aa9.61□□□□□ -0.87
NPLOC4-216ENST00000574344 ZNF106Q9H2Y7 1883 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 TEX51A0A1B0GUA7 166 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 CCDC188H7C350 402 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 ZNF185O15231 689 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 ECEL1O95672 775 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 SOD1P00441 154 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 PNLIPP16233 465 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 ALDH4A1P30038 563 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 CCKBRP32239 447 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 CXCR5P32302 372 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 UGT1A5P35504 534 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 MLLT3P42568 568 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 MAPK10P53779 464 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 RPL26P61254 145 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 IFI35P80217 286 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 PTSQ03393 145 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 TCEAL1Q15170 157 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 PPP2R5EQ16537 467 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 HSP90B2PQ58FF3 399 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 SEL1L2Q5TEA6 688 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 ARHGAP40Q5TG30 622 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 KAZNQ674X7 775 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 SLC9A4Q6AI14 798 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 OGFOD3Q6PK18 319 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 KDELC2Q7Z4H8 507 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 PIM3Q86V86 326 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 NRROSQ86YC3 692 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 CREG2Q8IUH2 290 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 NRSN1Q8IZ57 195 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 GOLGA6L1Q8N7Z2 621 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 LRRC57Q8N9N7 239 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 SPATA4Q8NEY3 305 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 EXD1Q8NHP7 514 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 COG1Q8WTW3 980 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 PATE1Q8WXA2 126 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 AGAP3Q96P47 875 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 BBC3Q96PG8 261 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 AGAP2Q99490 1192 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 DPH1Q9BZG8 443 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 CPNE5Q9HCH3 593 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 AKAP7Q9P0M2 348 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 ZNHIT2Q9UHR6 403 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 RPL26L1Q9UNX3 145 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 SLC17A4Q9Y2C5 497 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 LOXL2Q9Y4K0 774 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 BAHCC1Q9P281 2608 aa9.6□□□□□ -0.87
NPLOC4-216ENST00000574344 ATMQ13315 3056 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 SMG1Q96Q15 3661 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 CDRT15L2A8MXV6 281 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 ZNF487B1APH4 448 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 ANKRD66B4E2M5 251 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 CEP104O60308 925 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 MTA2O94776 668 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 CPNE6O95741 557 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 PRLP01236 227 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 FUCA1P04066 466 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 FGF1P05230 155 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 MMP2P08253 660 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 PIRTP0C851 137 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 ITIH1P19827 911 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 COMTP21964 271 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 SLC1A1P43005 524 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 OR1D5P58170 312 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 VSNL1P62760 191 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 SKOR1P84550 965 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 IHHQ14623 411 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 LLGL1Q15334 1064 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 QPCTQ16769 361 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 LONRF2Q1L5Z9 754 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 TAF1BQ53T94 588 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 FAM182AQ5T1J6 154 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 ALS2CLQ60I27 953 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 MFSD7Q6UXD7 560 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 B4GALNT4Q76KP1 1039 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 CHST15Q7LFX5 561 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 LYSMD3Q7Z3D4 306 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 NT5DC3Q86UY8 548 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 VSIG1Q86XK7 387 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 CCDC50Q8IVM0 306 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 IFT20Q8IY31 132 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 CBARPQ8N350 705 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 ACTRT1Q8TDG2 376 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 PRR11Q96HE9 360 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 CMKLR1Q99788 373 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 SPATA16Q9BXB7 569 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 CARD9Q9H257 536 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 FAM83DQ9H4H8 585 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 STN1Q9H668 368 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 RDH14Q9HBH5 336 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 SHOC2Q9UQ13 582 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 PLEKHM1Q9Y4G2 1056 aa9.59□□□□□ -0.87
NPLOC4-216ENST00000574344 TRBV23OR9-2A0A075B6M9 112 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 C3orf70A6NLC5 250 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 PSTPIP1O43586 416 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 SEC31AO94979 1220 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 ZRANB2O95218 330 aaKnown RBP eCLIP9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 PRB1P04280 392 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 TNFRSF8P28908 595 aa9.58□□□□□ -0.88
NPLOC4-216ENST00000574344 SLC5A2P31639 672 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms