RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 INPP5DQ92835 1189 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 SCAMP4Q969E2 229 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 NCLNQ969V3 563 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 MRGPRX2Q96LB1 330 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 ZSWIM3Q96MP5 696 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 PRPF18Q99633 342 aaKnown RBP10.05□□□□□ -0.8
SMG6-213ENST00000573166 VN1R3Q9BXE9 311 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 CARS2Q9HA77 564 aaKnown RBP10.05□□□□□ -0.8
SMG6-213ENST00000573166 SPATS2LQ9NUQ6 558 aaKnown RBP10.05□□□□□ -0.8
SMG6-213ENST00000573166 EVA1BQ9NVM1 165 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 RABGEF1Q9UJ41 708 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 FAM170BA6NMN3 283 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 CHUKO15111 745 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 LAMTOR5O43504 91 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 GALK1P51570 392 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 PRKAA2P54646 552 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 DAB2P98082 770 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 TDGQ13569 410 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 CST6Q15828 149 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 MSS51Q4VC12 460 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 MFSD4BQ5TF39 518 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 ARHGAP12Q8IWW6 846 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 TDRD1Q9BXT4 1180 aaKnown RBP10.04□□□□□ -0.8
SMG6-213ENST00000573166 EIF3LQ9Y262 564 aaKnown RBP10.04□□□□□ -0.8
SMG6-213ENST00000573166 ACTL7BQ9Y614 415 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 GSAPA4D1B5 854 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 WASH4PA8MWX3 477 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 NPC1O15118 1278 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 TRIM24O15164 1050 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 ENO1P06733 434 aaKnown RBP10.04□□□□□ -0.8
SMG6-213ENST00000573166 HNF1BP35680 557 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 ACTR1BP42025 376 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 AQP5P55064 265 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 ACTR1AP61163 376 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 ABCE1P61221 599 aaKnown RBP10.04□□□□□ -0.8
SMG6-213ENST00000573166 SPDYE7PQ495Y7 208 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 PPM1JQ5JR12 505 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 EMC10Q5UCC4 262 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 CACHD1Q5VU97 1274 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 CLDN19Q8N6F1 224 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 PPWD1Q96BP3 646 aaKnown RBP10.04□□□□□ -0.8
SMG6-213ENST00000573166 ZNF514Q96K75 400 aaPredicted RBP10.04□□□□□ -0.8
SMG6-213ENST00000573166 TPSD1Q9BZJ3 242 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 THAP1Q9NVV9 213 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 SOBPA7XYQ1 873 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 WASH3PC4AMC7 463 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 SLCO1B7G3V0H7 640 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 H0Y3Z8 333 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 TSPAN8P19075 237 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 BLKP51451 505 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 PRKG2Q13237 762 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 SIX1Q15475 284 aaPredicted RBP10.04□□□□□ -0.8
SMG6-213ENST00000573166 LILRA6Q6PI73 481 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 AMZ2Q86W34 360 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 PARP9Q8IXQ6 854 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 CPNE9Q8IYJ1 553 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 HIPK4Q8NE63 616 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 VPS37AQ8NEZ2 397 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 RNF217Q8TC41 542 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 RAB7BQ96AH8 199 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 SIGLEC10Q96LC7 697 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 PHF7Q9BWX1 381 aaPredicted RBP10.04□□□□□ -0.8
SMG6-213ENST00000573166 CXorf56Q9H5V9 222 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 SLC17A6Q9P2U8 582 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 COQ6Q9Y2Z9 468 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 KCNE2Q9Y6J6 123 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 SPACA6W5XKT8 324 aa10.04□□□□□ -0.8
SMG6-213ENST00000573166 A0A0J9YYE9 177 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 MID1O15344 667 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 RASSF9O75901 435 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 RECQL5O94762 991 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 TRBC1P01850 177 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 PDHA1P08559 390 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 ACP5P13686 325 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 ENO3P13929 434 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 HYAL1Q12794 435 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 CUL3Q13618 768 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 CYTH1Q15438 398 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 HNRNPA1L2Q32P51 320 aaKnown RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 HOMEZQ8IX15 550 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 TEX9Q8N6V9 391 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 RPLP0P6Q8NHW5 317 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 RFWD2Q8NHY2 731 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 TRPC4APQ8TEL6 797 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 NXNL1Q96CM4 212 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 ERP27Q96DN0 273 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 OLFM3Q96PB7 478 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 ABCG4Q9H172 646 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 IL21Q9HBE4 155 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 GIMAP4Q9NUV9 329 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 INTS10Q9NVR2 710 aaKnown RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 SOHLH2Q9NX45 425 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 ZDHHC3Q9NYG2 299 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 CIDEBQ9UHD4 219 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 CORO1CQ9ULV4 474 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 MGAT4DA6NG13 374 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 NOL3O60936 208 aaKnown RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 TGM3Q08188 693 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 ADGRD1Q6QNK2 874 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 SPRED2Q7Z698 418 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms