RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ZNF648Q5T619 568 aaPredicted RBP15.68■□□□□ 0.1
CHD3-215ENST00000572750 MICALCLQ6ZW33 695 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 OR13C4Q8NGS5 318 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 TMEM168Q9H0V1 697 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 EIF2B3Q9NR50 452 aaKnown RBP15.68■□□□□ 0.1
CHD3-215ENST00000572750 FKBPLQ9UIM3 349 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 SUFUQ9UMX1 484 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 NEU2Q9Y3R4 380 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 PCYT1BQ9Y5K3 369 aaPredicted RBP15.68■□□□□ 0.1
CHD3-215ENST00000572750 DGKBQ9Y6T7 804 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 UNC79Q9P2D8 2635 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 TCRBV7S3A2A0A539 114 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 TNFRSF10CO14798 259 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 LDB2O43679 373 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 SIGLEC6O43699 453 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 HYAL3O43820 417 aaPredicted RBP15.67■□□□□ 0.1
CHD3-215ENST00000572750 PRAMEF1O95521 474 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 ASMTLO95671 621 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 ECEL1O95672 775 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 TNFP01375 233 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 CTSEP14091 401 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 TRIP6Q15654 476 aaKnown RBP15.67■□□□□ 0.1
CHD3-215ENST00000572750 CHRNA6Q15825 494 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 CCDC38Q502W7 563 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 CERCAMQ5T4B2 595 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 PDPK2PQ6A1A2 396 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 C4orf22Q6V702 233 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 PDZD3Q86UT5 571 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 PHYKPLQ8IUZ5 450 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 OR4C6Q8NH72 309 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 GRK7Q8WTQ7 553 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 GLYATL1Q969I3 302 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 TRIM44Q96DX7 344 aaPredicted RBP15.67■□□□□ 0.1
CHD3-215ENST00000572750 DNAJC1Q96KC8 554 aaKnown RBP15.67■□□□□ 0.1
CHD3-215ENST00000572750 CNDP2Q96KP4 475 aaKnown RBP15.67■□□□□ 0.1
CHD3-215ENST00000572750 TBATAQ96M53 351 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 CASS4Q9NQ75 786 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 NLGN3Q9NZ94 848 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 KLK13Q9UKR3 277 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 TMPRSS11EQ9UL52 423 aa15.67■□□□□ 0.1
CHD3-215ENST00000572750 ZFC3H1O60293 1989 aaKnown RBP15.67■□□□□ 0.1
CHD3-215ENST00000572750 NEMP2A6NFY4 417 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 PCNX2A6NKB5 2137 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 PPFIA2O75334 1257 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 MTX2O75431 263 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 SLC25A14O95258 325 aaPredicted RBP15.66■□□□□ 0.1
CHD3-215ENST00000572750 GAS8O95995 478 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 ALPPL2P10696 532 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 CA5AP35218 305 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 PDE1BQ01064 536 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 DNAJC3Q13217 504 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 KCNJ11Q14654 390 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 PPP1R7Q15435 360 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 KHDC1Q4VXA5 237 aaKnown RBP15.66■□□□□ 0.1
CHD3-215ENST00000572750 ANKRD22Q5VYY1 191 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 ZDHHC20Q5W0Z9 365 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 KLHL7Q8IXQ5 586 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 FSTL5Q8N475 847 aaPredicted RBP15.66■□□□□ 0.1
CHD3-215ENST00000572750 CCL4L1Q8NHW4 92 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 CDC6Q99741 560 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 PRKAB1Q9Y478 270 aa15.66■□□□□ 0.1
CHD3-215ENST00000572750 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.65■□□□□ 0.1
CHD3-215ENST00000572750 LMO7DNF2Z398 122 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 YY2O15391 372 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 TMEM63AO94886 807 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 LDOC1O95751 146 aaPredicted RBP15.65■□□□□ 0.1
CHD3-215ENST00000572750 IVLP07476 585 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 MYF5P13349 255 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 TPSB2P20231 275 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 PAFAH1B1P43034 410 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 ELOCQ15369 112 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 TPSAB1Q15661 275 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 PROX2Q3B8N5 592 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 HS1BP3Q53T59 392 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 CCDC157Q569K6 752 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 ZNF534Q76KX8 674 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 GALNT13Q8IUC8 556 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 VPS35Q96QK1 796 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 OR2M4Q96R27 311 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 OR2AG1Q9H205 316 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 TOR4AQ9NXH8 423 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 SIRPGQ9P1W8 387 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 VPS18Q9P253 973 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 ATXN10Q9UBB4 475 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 DOLKQ9UPQ8 538 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 NEUROG3Q9Y4Z2 214 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 ST14Q9Y5Y6 855 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 CSNK1G3Q9Y6M4 447 aa15.65■□□□□ 0.1
CHD3-215ENST00000572750 TNFSF14O43557 240 aa15.64■□□□□ 0.09
CHD3-215ENST00000572750 UGT1A9O60656 530 aa15.64■□□□□ 0.09
CHD3-215ENST00000572750 DNAJC6O75061 913 aa15.64■□□□□ 0.09
CHD3-215ENST00000572750 SRP72O76094 671 aaKnown RBP15.64■□□□□ 0.09
CHD3-215ENST00000572750 ANXA6P08133 673 aa15.64■□□□□ 0.09
CHD3-215ENST00000572750 FTH1P19P0C7X4 201 aa15.64■□□□□ 0.09
CHD3-215ENST00000572750 ZNF8P17098 575 aaPredicted RBP15.64■□□□□ 0.09
CHD3-215ENST00000572750 UGT1A6P19224 532 aa15.64■□□□□ 0.09
CHD3-215ENST00000572750 UGT1A1P22309 533 aa15.64■□□□□ 0.09
CHD3-215ENST00000572750 UGT1A4P22310 534 aa15.64■□□□□ 0.09
CHD3-215ENST00000572750 UGT1A3P35503 534 aa15.64■□□□□ 0.09
CHD3-215ENST00000572750 UGT1A5P35504 534 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms