RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DGAT2L7PQ6IED9 249 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 VRK3Q8IV63 474 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 P3H2Q8IVL5 708 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 CPOQ8IVL8 374 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 SFTPA1Q8IWL2 248 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 RNF149Q8NC42 400 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 ABHD11Q8NFV4 315 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 CTCFLQ8NI51 663 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-214ENST00000572365 ACTRT2Q8TDY3 377 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 SETD7Q8WTS6 366 aaKnown RBP5.62□□□□□ -1.51
SF3B3-214ENST00000572365 DEPDC1BQ8WUY9 529 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 ASB12Q8WXK4 309 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 ADAMTS14Q8WXS8 1223 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 NPIPB3Q92617 1050 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 FAR2Q96K12 515 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 FNBP1Q96RU3 617 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 POLR3CQ9BUI4 534 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-214ENST00000572365 ZNF747Q9BV97 191 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 TRIM6Q9C030 488 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-214ENST00000572365 UNC45AQ9H3U1 944 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 CCDC134Q9H6E4 229 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 UPF2Q9HAU5 1272 aaKnown RBP5.62□□□□□ -1.51
SF3B3-214ENST00000572365 TRPV5Q9NQA5 729 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 SNX15Q9NRS6 342 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 LRIT1Q9P2V4 623 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 ANKRD17O75179 2603 aaKnown RBP5.62□□□□□ -1.51
SF3B3-214ENST00000572365 SF3B1O75533 1304 aaKnown RBP eCLIP5.62□□□□□ -1.517e-6■■■■■ 28.7
SF3B3-214ENST00000572365 CNTNAP2Q9UHC6 1331 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 CRYBG3Q68DQ2 2970 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 NBASA2RRP1 2371 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 A0A087WV48 116 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 CCDC187A0A096LP49 1063 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ERICH2A1L162 156 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 LINC00473A8K010 186 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 H0YIZ8 118 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 INO80B-WBP1J3KQ70 363 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 CES2O00748 559 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 NKX2-8O15522 239 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 TSPAN1O60635 241 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ERLIN2O94905 339 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 PRAMEF12O95522 483 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ZMYM6O95789 1325 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 CYP21A2P08686 494 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 OR4Q2P0C623 313 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ELFN1P0C7U0 828 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ZNF37AP17032 561 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-214ENST00000572365 NDUFB7P17568 137 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ARF4P18085 180 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-214ENST00000572365 THBS4P35443 961 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 CLCNKBP51801 687 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 HMGN5P82970 282 aaKnown RBP5.61□□□□□ -1.51
SF3B3-214ENST00000572365 TXNL4AP83876 142 aaKnown RBP5.61□□□□□ -1.51
SF3B3-214ENST00000572365 PSG6Q00889 435 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 GFPT1Q06210 699 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-214ENST00000572365 LMAN2Q12907 356 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 MAPK6Q16659 721 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 FAM187BQ17R55 369 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ITPRIPL2Q3MIP1 535 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ZNF569Q5MCW4 686 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ACSM6Q6P461 480 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 CD300LGQ6UXG3 332 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 FAM43BQ6ZT52 329 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ZSCAN30Q86W11 494 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 TEX19Q8NA77 164 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 TSTD1Q8NFU3 115 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 SLC9A6Q92581 669 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 GOLGA1Q92805 767 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 CAVIN3Q969G5 261 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 PRR11Q96HE9 360 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-214ENST00000572365 REXO5Q96IC2 774 aaKnown RBP5.61□□□□□ -1.51
SF3B3-214ENST00000572365 PDLIM2Q96JY6 352 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 PGLYRP2Q96PD5 576 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 PCDH15Q96QU1 1955 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 CCDC94Q9BW85 323 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-214ENST00000572365 SALL3Q9BXA9 1300 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 SPZ1Q9BXG8 430 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 FZD8Q9H461 694 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 SAP30LQ9HAJ7 183 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 IL21RQ9HBE5 538 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 HPS4Q9NQG7 708 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 TMLHEQ9NVH6 421 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 FOXJ2Q9P0K8 574 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 KCND3Q9UK17 655 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 CCL26Q9Y258 94 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 GDAQ9Y2T3 454 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 INSL5Q9Y5Q6 135 aa5.61□□□□□ -1.51
SF3B3-214ENST00000572365 ICE1Q9Y2F5 2266 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 NUP210Q8TEM1 1887 aaPredicted RBP5.6□□□□□ -1.51
SF3B3-214ENST00000572365 CENPEQ02224 2701 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 ITPR2Q14571 2701 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 IGKV6-21A0A0C4DH24 114 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 ARHGEF37A1IGU5 675 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 NPIPB8E9PQR5 432 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 M0QYT0 321 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 PTGESO14684 152 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 CAPN9O14815 690 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 MSH4O15457 936 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 EDIL3O43854 480 aa5.6□□□□□ -1.51
SF3B3-214ENST00000572365 ATG13O75143 517 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms