RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 OR6B1O95007 311 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 PAPSS2O95340 614 aaPredicted RBP8.71□□□□□ -1.01
LINC00558-201ENST00000569422 NDST3O95803 873 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 GALTP07902 379 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 TM4SF4P48230 202 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 STC1P52823 247 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 DIO3P55073 304 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 YBEYP58557 167 aaPredicted RBP8.71□□□□□ -1.01
LINC00558-201ENST00000569422 SQLEQ14534 574 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 CYTH1Q15438 398 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 RBBP7Q16576 425 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 ADGRG6Q86SQ4 1221 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 CLYBLQ8N0X4 340 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 AUTS2Q8WXX7 1259 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 RANBP9Q96S59 729 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 POLR3BQ9NW08 1133 aaPredicted RBP8.71□□□□□ -1.01
LINC00558-201ENST00000569422 SEPT3Q9UH03 358 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 CROTQ9UKG9 612 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 AP4B1Q9Y6B7 739 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 NYNRINQ9P2P1 1898 aaKnown RBP8.71□□□□□ -1.01
LINC00558-201ENST00000569422 C15orf38-AP3S2A0A0A6YYH1 394 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 E5RI56 91 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 AZIN1O14977 448 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 INSIG1O15503 277 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 BAIAP3O94812 1187 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 CRTAMO95727 393 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 SELPP16109 830 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 FDXRP22570 491 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 GKP32189 559 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 MC4RP32245 332 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 GRIA3P42263 894 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 MAGEA11P43364 429 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 HK2P52789 917 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 HSD17B7P56937 341 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 FAM189BP81408 668 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 ADGRE1Q14246 886 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 PLA2G4EQ3MJ16 856 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 ATXN7L2Q5T6C5 722 aaPredicted RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 ARPINQ7Z6K5 226 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 SATL1Q86VE3 508 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 IPCEF1Q8WWN9 437 aaPredicted RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 VPS33AQ96AX1 596 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 FEM1CQ96JP0 617 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 PRICKLE1Q96MT3 831 aaPredicted RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 AARSD1Q9BTE6 412 aaKnown RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 C2orf49Q9BVC5 232 aaPredicted RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 RNF38Q9H0F5 515 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 ABCG8Q9H221 673 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 PAPOLBQ9NRJ5 636 aaKnown RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 TAS2R13Q9NYV9 303 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 PDP2Q9P2J9 529 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 AGO1Q9UL18 857 aaKnown RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 FCF1Q9Y324 198 aaKnown RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 PCDHB9Q9Y5E1 797 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 RAI2Q9Y5P3 530 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 FAM149AA5PLN7 773 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 C2orf81A6NN90 581 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 H0Y626 953 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 TIPRLO75663 272 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 BCAS2O75934 225 aaPredicted RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 INHAP05111 366 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 MTHFD2P13995 350 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 GRIA2P42262 883 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 ALDH7A1P49419 539 aaKnown RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 CDKL1Q00532 357 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 TRIM25Q14258 630 aaKnown RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 C18orf21Q32NC0 220 aaPredicted RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 MTX3Q5HYI7 312 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 OGFRL1Q5TC84 451 aaPredicted RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 UGT3A1Q6NUS8 523 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 RETREG3Q86VR2 466 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 FUNDC1Q8IVP5 155 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 DNAJB14Q8TBM8 379 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 NUDT8Q8WV74 236 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 CLIP3Q96DZ5 547 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 FAR2Q96K12 515 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 CIB1Q99828 191 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 NOL11Q9H8H0 719 aaKnown RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 SPAG4Q9NPE6 437 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 BCAP29Q9UHQ4 241 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 AP4S1Q9Y587 144 aa8.71□□□□□ -1.02
LINC00558-201ENST00000569422 TDRD15B5MCY1 1934 aaKnown RBP8.71□□□□□ -1.02
LINC00558-201ENST00000569422 A6NJY4 79 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 TMEM189-UBE2V1I3L0A0 370 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 K7ERQ8 282 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 ACOT8O14734 319 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 STX7O15400 261 aaKnown RBP8.7□□□□□ -1.02
LINC00558-201ENST00000569422 AKAP10O43572 662 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 FOXD2O60548 495 aaPredicted RBP8.7□□□□□ -1.02
LINC00558-201ENST00000569422 KATNA1O75449 491 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 ECI2O75521 394 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 SEC24AO95486 1093 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 GUCA1CO95843 209 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 C1RP00736 705 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 ALPIP09923 528 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 CKMT2P17540 419 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 UGT1A6P19224 532 aa8.7□□□□□ -1.02
LINC00558-201ENST00000569422 CST5P28325 142 aaPredicted RBP8.7□□□□□ -1.02
LINC00558-201ENST00000569422 MZF1P28698 734 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms