RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 CDH17Q12864 832 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 CALCOCO2Q13137 446 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 PTPRCAPQ14761 206 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 ELOCQ15369 112 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 ALG11Q2TAA5 492 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 ESRP1Q6NXG1 681 aaKnown RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 CRTC1Q6UUV9 634 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 PPP1R21Q6ZMI0 780 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 Q6ZVL8 140 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 HSD11B1LQ7Z5J1 315 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 LINC00523Q86TU6 105 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 MARCH9Q86YJ5 346 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 IFT20Q8IY31 132 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 GSPT2Q8IYD1 628 aaKnown RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 CBARPQ8N350 705 aaPredicted RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 FSTL5Q8N475 847 aaPredicted RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 KDF1Q8NAX2 398 aaPredicted RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 BBOF1Q8ND07 529 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 OR56A4Q8NGH8 313 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 SCG3Q8WXD2 468 aaKnown RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 ZCCHC14Q8WYQ9 949 aaKnown RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 UBXN4Q92575 508 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 FUBP1Q96AE4 644 aaKnown RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 SIGLEC10Q96LC7 697 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 TRIM56Q9BRZ2 755 aaKnown RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 LRRC61Q9BV99 259 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 ADGRE3Q9BY15 652 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 ABCG4Q9H172 646 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 WDR26Q9H7D7 661 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 FAM114A2Q9NRY5 505 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 SYBUQ9NX95 663 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 GOLGA6AQ9NYA3 693 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 MOSPD1Q9UJG1 213 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 PNMA8BQ9ULN7 279 aaPredicted RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 NFU1Q9UMS0 254 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 RPL26L1Q9UNX3 145 aaKnown RBP9.34□□□□□ -0.91
UBR1-210ENST00000569337 KCTD3Q9Y597 815 aa9.34□□□□□ -0.91
UBR1-210ENST00000569337 CPED1A4D0V7 1026 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 TMEM202A6NGA9 273 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 CAPN8A6NHC0 703 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 YY2O15391 372 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 LDB2O43679 373 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 CLDN7O95471 211 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 MLNP12872 115 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 ZNF30P17039 623 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 CLDN6P56747 220 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 KIAA1024LP59773 190 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 DHX9Q08211 1270 aaKnown RBP9.33□□□□□ -0.92
UBR1-210ENST00000569337 POU6F1Q14863 301 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 FASTKD3Q14CZ7 662 aaKnown RBP9.33□□□□□ -0.92
UBR1-210ENST00000569337 TCEA2Q15560 299 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 CCDC38Q502W7 563 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 HP1BP3Q5SSJ5 553 aaPredicted RBP9.33□□□□□ -0.92
UBR1-210ENST00000569337 HES3Q5TGS1 186 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 LRRC66Q68CR7 880 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 RAET1GQ6H3X3 334 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 CCDC70Q6NSX1 233 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 LVRNQ6Q4G3 990 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 RFLNAQ6ZTI6 216 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 LYSMD3Q7Z3D4 306 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 GKN2Q86XP6 184 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 SDR16C5Q8N3Y7 309 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 TTC30BQ8N4P2 665 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 DNAAF3Q8N9W5 541 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 BLOC1S5Q8TDH9 187 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 DTD2Q96FN9 168 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 ZNF778Q96MU6 729 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 LYSMD1Q96S90 227 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 LGR4Q9BXB1 951 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 PARD6BQ9BYG5 372 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 CLPBQ9H078 707 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 CCDC86Q9H6F5 360 aaKnown RBP9.33□□□□□ -0.92
UBR1-210ENST00000569337 PLAC1Q9HBJ0 212 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 MAGEE1Q9HCI5 957 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 XAB2Q9HCS7 855 aaKnown RBP9.33□□□□□ -0.92
UBR1-210ENST00000569337 PHPT1Q9NRX4 125 aaPredicted RBP9.33□□□□□ -0.92
UBR1-210ENST00000569337 ZMIZ1Q9ULJ6 1067 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 ZNF711Q9Y462 761 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 ARL5AQ9Y689 179 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 DGKBQ9Y6T7 804 aa9.33□□□□□ -0.92
UBR1-210ENST00000569337 TMEM131Q92545 1883 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 LY6G6EA0A0G2JKS1 128 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 CCDC78A2IDD5 438 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 EME2A4GXA9 379 aaPredicted RBP9.32□□□□□ -0.92
UBR1-210ENST00000569337 TRABD2BA6NFA1 517 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 E7ESA3 106 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 SMAPO00193 183 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 TNFRSF10CO14798 259 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 CTIFO43310 598 aaKnown RBP9.32□□□□□ -0.92
UBR1-210ENST00000569337 BUD23O43709 281 aaKnown RBP9.32□□□□□ -0.92
UBR1-210ENST00000569337 OPA1O60313 960 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 PPFIA2O75334 1257 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 GP1BAP07359 652 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 CELA2BP08218 269 aaPredicted RBP9.32□□□□□ -0.92
UBR1-210ENST00000569337 FAM153BP0C7A2 387 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 MYCLP1P12525 358 aaPredicted RBP9.32□□□□□ -0.92
UBR1-210ENST00000569337 TNFRSF8P28908 595 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 GPR1P46091 355 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 NPY2RP49146 381 aa9.32□□□□□ -0.92
UBR1-210ENST00000569337 TUBB4BP68371 445 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms