RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 CHUKO15111 745 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 GPR39O43194 453 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 MTSS1O43312 755 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 NUAK1O60285 661 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 TNFSF15O95150 251 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 CPNE6O95741 557 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 EPOP01588 193 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ACP5P13686 325 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ZNF8P17098 575 aaPredicted RBP7.74□□□□□ -1.17
CDH3-209ENST00000569080 ITIH1P19827 911 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 RBL1P28749 1068 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 CD1CP29017 333 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 CA5AP35218 305 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 HMGCLP35914 325 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ETV5P41161 510 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 GPR3P46089 330 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ARSDP51689 593 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 OR1D5P58170 312 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 COPS2P61201 443 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 CLN3Q13286 438 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 XRCC4Q13426 336 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 SQSTM1Q13501 440 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 C16orf72Q14CZ0 275 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 SLC1A5Q15758 541 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 CLPPQ16740 277 aaPredicted RBP7.74□□□□□ -1.17
CDH3-209ENST00000569080 MAP9Q49MG5 647 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ODF2Q5BJF6 829 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 SIRPB2Q5JXA9 342 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ZNF648Q5T619 568 aaPredicted RBP7.74□□□□□ -1.17
CDH3-209ENST00000569080 AADACL2Q6P093 401 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 PCSK4Q6UW60 755 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 LRRC69Q6ZNQ3 347 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 BZW1Q7L1Q6 419 aaKnown RBP7.74□□□□□ -1.17
CDH3-209ENST00000569080 RAB11FIP2Q7L804 512 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ADGRG6Q86SQ4 1221 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 CCDC50Q8IVM0 306 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ZNF547Q8IVP9 402 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 KLHDC8BQ8IXV7 354 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ACTL9Q8TC94 416 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 CCHCR1Q8TD31 782 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 KCNE4Q8WWG9 221 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 GLYATL1Q969I3 302 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 NAF1Q96HR8 494 aaKnown RBP7.74□□□□□ -1.17
CDH3-209ENST00000569080 FCRL3Q96P31 734 aaPredicted RBP7.74□□□□□ -1.17
CDH3-209ENST00000569080 PLEKHG4BQ96PX9 1271 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 VAT1Q99536 393 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ANP32EQ9BTT0 268 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ZSCAN5AQ9BUG6 496 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 SPATA16Q9BXB7 569 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 HEMGNQ9BXL5 484 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 OSBPL8Q9BZF1 889 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 GBA3Q9H227 469 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 SEMA6CQ9H3T2 930 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 C10orf88Q9H8K7 445 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 RMI1Q9H9A7 625 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 ARFGAP3Q9NP61 516 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 LUC7LQ9NQ29 371 aaKnown RBP7.74□□□□□ -1.17
CDH3-209ENST00000569080 TMEM9Q9P0T7 183 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 KLHL8Q9P2G9 620 aaPredicted RBP7.74□□□□□ -1.17
CDH3-209ENST00000569080 ATXN10Q9UBB4 475 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 TRIM10Q9UDY6 481 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 FAM153AQ9UHL3 310 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 KCNK6Q9Y257 313 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 LOXL2Q9Y4K0 774 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 SDK2Q58EX2 2172 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 BAHCC1Q9P281 2608 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 GCN1Q92616 2671 aaKnown RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 IGHV5-10-1A0A0J9YXX1 117 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 CCDC66A2RUB6 948 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 RHPN2P1A8MT19 583 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 GPR89AB7ZAQ6 455 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 C9orf172C9J069 976 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 TMX2-CTNND1H3BSU7 103 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 GRID2O43424 1007 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 MTX2O75431 263 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 ASMTLO95671 621 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 GPR89BP0CG08 455 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 THRAP10827 490 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 PYGMP11217 842 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 HLA-DPA1P20036 260 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 RBMS1P29558 406 aaKnown RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 CDC25BP30305 580 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 ADRA1AP35348 466 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 CLCNKAP51800 687 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 UBE2IP63279 158 aaKnown RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 OTUD4Q01804 1114 aaKnown RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 KLF1Q13351 362 aaPredicted RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 MPP3Q13368 585 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 MSLNQ13421 630 aaPredicted RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 AMZ1Q400G9 498 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 ATP13A5Q4VNC0 1218 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 IYDQ6PHW0 289 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 FOXR1Q6PIV2 292 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 CRTC3Q6UUV7 619 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 CHST15Q7LFX5 561 aaPredicted RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 C11orf96Q7Z7L8 435 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 ZNF761Q86XN6 746 aaPredicted RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 PHYKPLQ8IUZ5 450 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 FBXO39Q8N4B4 442 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 DTX3LQ8TDB6 740 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms