RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 GPR3P46089 330 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 GEMP55040 296 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 GSDMDP57764 484 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 ZFP36L1Q07352 338 aaKnown RBP20.09■□□□□ 0.81
CLK3-225ENST00000569063 EIF3IQ13347 325 aaKnown RBP20.09■□□□□ 0.81
CLK3-225ENST00000569063 LRRC69Q6ZNQ3 347 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 TTC30BQ8N4P2 665 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 SLC25A41Q8N5S1 370 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 DTX3LQ8TDB6 740 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 PATE1Q8WXA2 126 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 GORASP1Q9BQQ3 440 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 FSD1LQ9BXM9 530 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 STRADBQ9C0K7 418 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 PACSIN2Q9UNF0 486 aaPredicted RBP20.09■□□□□ 0.81
CLK3-225ENST00000569063 PRKAB1Q9Y478 270 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 ADGRG1Q9Y653 693 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 ADAMTS20P59510 1910 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 ARHGEF17Q96PE2 2063 aaPredicted RBP20.09■□□□□ 0.81
CLK3-225ENST00000569063 PKD1L2Q7Z442 2459 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 DSPP15924 2871 aaKnown RBP20.09■□□□□ 0.81
CLK3-225ENST00000569063 ACACAQ13085 2346 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 URB1O60287 2271 aaKnown RBP20.08■□□□□ 0.81
CLK3-225ENST00000569063 DDX3YO15523 660 aaKnown RBP20.08■□□□□ 0.81
CLK3-225ENST00000569063 GRID2O43424 1007 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 STK10O94804 968 aaKnown RBP20.08■□□□□ 0.81
CLK3-225ENST00000569063 FTCDO95954 541 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 ZNF8P17098 575 aaPredicted RBP20.08■□□□□ 0.81
CLK3-225ENST00000569063 RBMS1P29558 406 aaKnown RBP20.08■□□□□ 0.81
CLK3-225ENST00000569063 MLLT3P42568 568 aaPredicted RBP20.08■□□□□ 0.81
CLK3-225ENST00000569063 INHBCP55103 352 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 ANKRD20A2Q5SQ80 823 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 ANKRD20A1Q5TYW2 823 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 ANKRD20A3Q5VUR7 823 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 ZDHHC20Q5W0Z9 365 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 DARS2Q6PI48 645 aaKnown RBP20.08■□□□□ 0.81
CLK3-225ENST00000569063 CHST15Q7LFX5 561 aaPredicted RBP20.08■□□□□ 0.81
CLK3-225ENST00000569063 HES6Q96HZ4 224 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 VPS35Q96QK1 796 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 FAM118BQ9BPY3 351 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 FOXP3Q9BZS1 431 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 BPIFA1Q9NP55 256 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 THSD1Q9NS62 852 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 IL17CQ9P0M4 197 aa20.08■□□□□ 0.81
CLK3-225ENST00000569063 ATXN7L1Q9ULK2 861 aaPredicted RBP20.08■□□□□ 0.81
CLK3-225ENST00000569063 AAR2Q9Y312 384 aaKnown RBP20.08■□□□□ 0.81
CLK3-225ENST00000569063 CDRT15L2A8MXV6 281 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 CHUKO15111 745 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 PPM1DO15297 605 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 KCNN4O15554 427 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 ALDH4A1P30038 563 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 ABCG1P45844 678 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 FASLGP48023 281 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 PCBP4P57723 403 aaKnown RBP20.07■□□□□ 0.8
CLK3-225ENST00000569063 OR1D5P58170 312 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 CLPPQ16740 277 aaPredicted RBP20.07■□□□□ 0.8
CLK3-225ENST00000569063 RANBP10Q6VN20 620 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 ADGRG6Q86SQ4 1221 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 PHYKPLQ8IUZ5 450 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 SFRP1Q8N474 314 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 TTC13Q8NBP0 860 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 ZNF248Q8NDW4 579 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 UBE2Q2Q8WVN8 375 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 OR2AG1Q9H205 316 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 EPB41L5Q9HCM4 733 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 ARFGAP3Q9NP61 516 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 IL26Q9NPH9 171 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLK3-225ENST00000569063 RALYQ9UKM9 306 aaKnown RBP20.07■□□□□ 0.8
CLK3-225ENST00000569063 CAPN6Q9Y6Q1 641 aa20.07■□□□□ 0.8
CLK3-225ENST00000569063 PMS2P1A4D2B8 440 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 GOLGA6L9A6NEM1 432 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 PLD2O14939 933 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 CPNE6O95741 557 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 EML2O95834 649 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 AGTP01019 485 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 ACP5P13686 325 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 ITPKBP27987 946 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 ADRA1AP35348 466 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 CLCNKAP51800 687 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 KLF1Q13351 362 aaPredicted RBP20.06■□□□□ 0.8
CLK3-225ENST00000569063 BIRC2Q13490 618 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 PRPSAP1Q14558 356 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 ZNF648Q5T619 568 aaPredicted RBP20.06■□□□□ 0.8
CLK3-225ENST00000569063 IYDQ6PHW0 289 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 RAB11FIP2Q7L804 512 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 TMPRSS9Q7Z410 1059 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 GLT6D1Q7Z4J2 308 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 PIM3Q86V86 326 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 SLITRK4Q8IW52 837 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 BLOC1S5Q8TDH9 187 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 TMEM159Q96B96 161 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 SPATA13Q96N96 652 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 PPP1R2P1Q96PQ5 205 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 TSGA10Q9BZW7 698 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 TBC1D29Q9UFV1 150 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 TMPRSS11EQ9UL52 423 aa20.06■□□□□ 0.8
CLK3-225ENST00000569063 SCN8AQ9UQD0 1980 aa20.05■□□□□ 0.8
CLK3-225ENST00000569063 A6NCN8 305 aa20.05■□□□□ 0.8
CLK3-225ENST00000569063 VEGFDO43915 354 aa20.05■□□□□ 0.8
CLK3-225ENST00000569063 PPFIA2O75334 1257 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms