RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 PDCD2Q16342 344 aaPredicted RBP17.57■□□□□ 0.4
NEIL1-221ENST00000569035 ZDHHC20Q5W0Z9 365 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 ANKRD54Q6NXT1 300 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 TMEM207Q6UWW9 146 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 CMTM8Q8IZV2 173 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 PGAM4Q8N0Y7 254 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 PELI3Q8N2H9 469 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 PHTF2Q8N3S3 785 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 SPATA6LQ8N4H0 392 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 WDR60Q8WVS4 1066 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 ISG20Q96AZ6 181 aaKnown RBP17.57■□□□□ 0.4
NEIL1-221ENST00000569035 TUBGCP5Q96RT8 1024 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 ATOH8Q96SQ7 321 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 GPR63Q9BZJ6 419 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 WDR55Q9H6Y2 383 aaPredicted RBP17.57■□□□□ 0.4
NEIL1-221ENST00000569035 ATP13A3Q9H7F0 1226 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 RNF112Q9ULX5 631 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 CCL26Q9Y258 94 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 ZNF711Q9Y462 761 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 DOCK6Q96HP0 2047 aa17.57■□□□□ 0.4
NEIL1-221ENST00000569035 UNC80Q8N2C7 3258 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 TMEM265A0A087WTH1 108 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 NEMP1O14524 444 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 UBDO15205 165 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 MLYCDO95822 493 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 ACADSP16219 412 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 RPS3P23396 243 aaKnown RBP eCLIP17.56■□□□□ 0.4
NEIL1-221ENST00000569035 MZF1P28698 734 aaPredicted RBP17.56■□□□□ 0.4
NEIL1-221ENST00000569035 ACADVLP49748 655 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 IL2P60568 153 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 SLC25A3Q00325 362 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 DLX2Q07687 328 aaPredicted RBP17.56■□□□□ 0.4
NEIL1-221ENST00000569035 ART3Q13508 389 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 SEMA3AQ14563 771 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 TAF11Q15544 211 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 EP400NLQ6ZTU2 488 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 Q7L0L9 218 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 GPR149Q86SP6 731 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 LDB1Q86U70 411 aaPredicted RBP17.56■□□□□ 0.4
NEIL1-221ENST00000569035 DEFB107AQ8IZN7 70 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 CBARPQ8N350 705 aaPredicted RBP17.56■□□□□ 0.4
NEIL1-221ENST00000569035 POU5F2Q8N7G0 328 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 EXOC2Q96KP1 924 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 IL17CQ9P0M4 197 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 CLEC1BQ9P126 229 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 ATG2AQ2TAZ0 1938 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 E5RI56 91 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 HTRA2O43464 458 aaPredicted RBP17.56■□□□□ 0.4
NEIL1-221ENST00000569035 KLK8O60259 260 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 SNAP91O60641 907 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 SLC34A2O95436 690 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 PDHA1P08559 390 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 PIRTP0C851 137 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 GFAPP14136 432 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 ZNF7P17097 686 aaPredicted RBP17.56■□□□□ 0.4
NEIL1-221ENST00000569035 FMO4P31512 558 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 STX1BP61266 288 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 SNRPD1P62314 119 aaKnown RBP17.56■□□□□ 0.4
NEIL1-221ENST00000569035 PTPRNQ16849 979 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 MUM1Q2TAK8 710 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 GPR33Q49SQ1 333 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 ANKS6Q68DC2 871 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 LRRC74BQ6ZQY2 392 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 FBXO39Q8N4B4 442 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 PHF21BQ96EK2 531 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 PANX3Q96QZ0 392 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 NUSAP1Q9BXS6 441 aaKnown RBP17.56■□□□□ 0.4
NEIL1-221ENST00000569035 MRPL1Q9BYD6 325 aaKnown RBP17.56■□□□□ 0.4
NEIL1-221ENST00000569035 CYP4F12Q9HCS2 524 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 TMEM45AQ9NWC5 275 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 CFAP97Q9P2B7 532 aa17.56■□□□□ 0.4
NEIL1-221ENST00000569035 LOC100653049A0A140TA62 436 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 H0Y3Z8 333 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 LEFTY2O00292 366 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 CCL22O00626 93 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 GIPC1O14908 333 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 NVLO15381 856 aaKnown RBP17.55■□□□□ 0.4
NEIL1-221ENST00000569035 GJB3O75712 270 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 KRT34O76011 436 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 SERPINA4P29622 427 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 UNC50Q53HI1 259 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 ZRANB3Q5FWF4 1079 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 TLDC1Q6P9B6 456 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 SNX32Q86XE0 403 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 PTGR2Q8N8N7 351 aaPredicted RBP17.55■□□□□ 0.4
NEIL1-221ENST00000569035 DNAJC9Q8WXX5 260 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 PTERQ96BW5 349 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 NAF1Q96HR8 494 aaKnown RBP17.55■□□□□ 0.4
NEIL1-221ENST00000569035 SLC25A23Q9BV35 468 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 POLR3BQ9NW08 1133 aaPredicted RBP17.55■□□□□ 0.4
NEIL1-221ENST00000569035 PCDHB9Q9Y5E1 797 aa17.55■□□□□ 0.4
NEIL1-221ENST00000569035 HELZP42694 1942 aaKnown RBP17.55■□□□□ 0.4
NEIL1-221ENST00000569035 NEMP2A6NFY4 417 aa17.54■□□□□ 0.4
NEIL1-221ENST00000569035 BBIP1A8MTZ0 92 aa17.54■□□□□ 0.4
NEIL1-221ENST00000569035 PRMT5O14744 637 aaPredicted RBP17.54■□□□□ 0.4
NEIL1-221ENST00000569035 LIN7AO14910 233 aaPredicted RBP17.54■□□□□ 0.4
NEIL1-221ENST00000569035 MAP3K7O43318 606 aa17.54■□□□□ 0.4
NEIL1-221ENST00000569035 BUD23O43709 281 aaKnown RBP17.54■□□□□ 0.4
NEIL1-221ENST00000569035 CHEK2O96017 543 aa17.54■□□□□ 0.4
NEIL1-221ENST00000569035 HNRNPLP14866 589 aaKnown RBP eCLIP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms