RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 NAGSQ8N159 534 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 FAM71DQ8N9W8 422 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 BLOC1S5Q8TDH9 187 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 ZDHHC1Q8WTX9 485 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 DCBLD2Q96PD2 775 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 OR2M4Q96R27 311 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 SPATA16Q9BXB7 569 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 CDH19Q9H159 772 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 LRRN3Q9H3W5 708 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 SYNDIG1Q9H7V2 258 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 POLR1BQ9H9Y6 1135 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 ASCL3Q9NQ33 180 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 LRIT1Q9P2V4 623 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 AAR2Q9Y312 384 aaKnown RBP24.94■■□□□ 1.58
FANCA-228ENST00000567943 PRKAB1Q9Y478 270 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 C5orf60A6NFR6 353 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 D6RAR5 112 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 NUDT21O43809 227 aaKnown RBP24.93■■□□□ 1.58
FANCA-228ENST00000567943 ECEL1O95672 775 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 PNLIPP16233 465 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 BPIP17213 487 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 DCDC1P59894 354 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 SPRED1Q7Z699 444 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 SLC13A5Q86YT5 568 aaPredicted RBP24.93■■□□□ 1.58
FANCA-228ENST00000567943 CCNJLQ8IV13 435 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 Q8N9G6 341 aaPredicted RBP24.93■■□□□ 1.58
FANCA-228ENST00000567943 ATG4AQ8WYN0 398 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 FGF11Q92914 225 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 GRAMD1AQ96CP6 724 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 TMEM121Q9BTD3 319 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 TRABDQ9H4I3 376 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 BPIFA1Q9NP55 256 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 HACD3Q9P035 362 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 NFKBIL1Q9UBC1 381 aaPredicted RBP24.93■■□□□ 1.58
FANCA-228ENST00000567943 LHX6Q9UPM6 363 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 IGSF10Q6WRI0 2623 aa24.93■■□□□ 1.58
FANCA-228ENST00000567943 SMG1Q96Q15 3661 aaKnown RBP24.92■■□□□ 1.58
FANCA-228ENST00000567943 ITPKBP27987 946 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 B4GALNT1Q00973 533 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 OLIG2Q13516 323 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 C3orf38Q5JPI3 329 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 ARHGEF18Q6ZSZ5 1173 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 TMPRSS9Q7Z410 1059 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 ZNF438Q7Z4V0 828 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 ARL14Q8N4G2 192 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 TTC30BQ8N4P2 665 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 TRIM58Q8NG06 486 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 CRELD1Q96HD1 420 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 GFM1Q96RP9 751 aaKnown RBP24.92■■□□□ 1.58
FANCA-228ENST00000567943 APOL2Q9BQE5 337 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 ZSCAN5AQ9BUG6 496 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 FOXP3Q9BZS1 431 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 CARD9Q9H257 536 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 VPS18Q9P253 973 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 ATXN7L1Q9ULK2 861 aaPredicted RBP24.92■■□□□ 1.58
FANCA-228ENST00000567943 PTPRQQ9UMZ3 2332 aa24.92■■□□□ 1.58
FANCA-228ENST00000567943 B4GAT1O43505 415 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 EML2O95834 649 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 ADRA1AP35348 466 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 HMGCLP35914 325 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 ACTR1BP42025 376 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 GDF10P55107 478 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 ACTR1AP61163 376 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 ZNF569Q5MCW4 686 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 ZNF648Q5T619 568 aaPredicted RBP24.91■■□□□ 1.58
FANCA-228ENST00000567943 GLT6D1Q7Z4J2 308 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 GALNT13Q8IUC8 556 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 TRAM1L1Q8N609 369 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 ARFGAP3Q9NP61 516 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 TMPRSS11EQ9UL52 423 aa24.91■■□□□ 1.58
FANCA-228ENST00000567943 MGAQ8IWI9 3026 aa24.9■■□□□ 1.58
FANCA-228ENST00000567943 ACTN2P35609 894 aa24.9■■□□□ 1.58
FANCA-228ENST00000567943 NR1D2Q14995 579 aa24.9■■□□□ 1.58
FANCA-228ENST00000567943 IGF2-ASQ6U949 168 aa24.9■■□□□ 1.58
FANCA-228ENST00000567943 RANBP10Q6VN20 620 aa24.9■■□□□ 1.58
FANCA-228ENST00000567943 PPP1R2P1Q96PQ5 205 aa24.9■■□□□ 1.58
FANCA-228ENST00000567943 TLR10Q9BXR5 811 aa24.9■■□□□ 1.58
FANCA-228ENST00000567943 ATXN10Q9UBB4 475 aa24.9■■□□□ 1.58
FANCA-228ENST00000567943 ZNHIT2Q9UHR6 403 aa24.9■■□□□ 1.58
FANCA-228ENST00000567943 PPM1DO15297 605 aa24.89■■□□□ 1.58
FANCA-228ENST00000567943 BUD23O43709 281 aaKnown RBP24.89■■□□□ 1.58
FANCA-228ENST00000567943 SPARCL1Q14515 664 aa24.89■■□□□ 1.58
FANCA-228ENST00000567943 PARP6Q2NL67 630 aa24.89■■□□□ 1.58
FANCA-228ENST00000567943 C1orf54Q8WWF1 131 aa24.89■■□□□ 1.58
FANCA-228ENST00000567943 ZNF578Q96N58 590 aaPredicted RBP24.89■■□□□ 1.58
FANCA-228ENST00000567943 SLC46A1Q96NT5 459 aa24.89■■□□□ 1.58
FANCA-228ENST00000567943 PLEKHG4BQ96PX9 1271 aa24.89■■□□□ 1.58
FANCA-228ENST00000567943 FRMD8P1Q9BZ68 369 aaPredicted RBP24.89■■□□□ 1.58
FANCA-228ENST00000567943 IL17CQ9P0M4 197 aa24.89■■□□□ 1.58
FANCA-228ENST00000567943 PCDHGA8Q9Y5G5 932 aa24.89■■□□□ 1.58
FANCA-228ENST00000567943 LIASO43766 372 aa24.88■■□□□ 1.57
FANCA-228ENST00000567943 SLC25A14O95258 325 aaPredicted RBP24.88■■□□□ 1.57
FANCA-228ENST00000567943 METTL18O95568 372 aa24.88■■□□□ 1.57
FANCA-228ENST00000567943 ZNF8P17098 575 aaPredicted RBP24.88■■□□□ 1.57
FANCA-228ENST00000567943 OR1D5P58170 312 aa24.88■■□□□ 1.57
FANCA-228ENST00000567943 LRP8Q14114 963 aa24.88■■□□□ 1.57
FANCA-228ENST00000567943 PDPK2PQ6A1A2 396 aa24.88■■□□□ 1.57
FANCA-228ENST00000567943 LSMEM2Q8N112 164 aa24.88■■□□□ 1.57
FANCA-228ENST00000567943 GLYATL1Q969I3 302 aa24.88■■□□□ 1.57
FANCA-228ENST00000567943 LIN37Q96GY3 246 aaPredicted RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms