RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 COBLL1Q53SF7 1204 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
SMG1-213ENST00000567737 GJB7Q6PEY0 223 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 ZNF517Q6ZMY9 492 aaPredicted RBP13.59□□□□□ -0.23
SMG1-213ENST00000567737 Q6ZVL8 140 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 HSD11B1LQ7Z5J1 315 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 TRIM74Q86UV6 250 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 BPHLQ86WA6 291 aaPredicted RBP13.59□□□□□ -0.23
SMG1-213ENST00000567737 ZADH2Q8N4Q0 377 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 TMEM35BQ8NCS4 154 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 KLHL6Q8WZ60 621 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 SHC3Q92529 594 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 INPP5DQ92835 1189 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 MAGEB5Q9BZ81 275 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 PDCL3Q9H2J4 239 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 UCK1Q9HA47 277 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 PDFQ9HBH1 243 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 WASH6PQ9NQA3 447 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 KCNK6Q9Y257 313 aa13.59□□□□□ -0.23
SMG1-213ENST00000567737 PSMD11O00231 422 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 E2F3O00716 465 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 TRAFD1O14545 582 aaPredicted RBP13.58□□□□□ -0.24
SMG1-213ENST00000567737 KIF1CO43896 1103 aaKnown RBP13.58□□□□□ -0.24
SMG1-213ENST00000567737 KLHL41O60662 606 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 PALMO75781 387 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 CYP2A6P11509 494 aaPredicted RBP13.58□□□□□ -0.24
SMG1-213ENST00000567737 HTR1EP28566 365 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 GABRB2P47870 512 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 DPTQ07507 201 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 PAK1Q13153 545 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 ZNF235Q14590 738 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 RAB6CQ53S08 254 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 IGFL3Q6UXB1 125 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 ADAMTSL4Q6UY14 1074 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 BNC2Q6ZN30 1099 aaPredicted RBP13.58□□□□□ -0.24
SMG1-213ENST00000567737 FAM92BQ6ZTR7 304 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 CUZD1Q86UP6 607 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 ENDOVQ8N8Q3 282 aaKnown RBP13.58□□□□□ -0.24
SMG1-213ENST00000567737 SIDT2Q8NBJ9 832 aaKnown RBP13.58□□□□□ -0.24
SMG1-213ENST00000567737 TSEN2Q8NCE0 465 aaKnown RBP13.58□□□□□ -0.24
SMG1-213ENST00000567737 CCDC34Q96HJ3 373 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 CINPQ9BW66 212 aaPredicted RBP13.58□□□□□ -0.24
SMG1-213ENST00000567737 RAB6CQ9H0N0 254 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 TMEM59LQ9UK28 342 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 PRKAB1Q9Y478 270 aa13.58□□□□□ -0.24
SMG1-213ENST00000567737 A0A1W2PQ67 120 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 J3KR12 359 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 PRICKLE3O43900 615 aaPredicted RBP13.57□□□□□ -0.24
SMG1-213ENST00000567737 IPO13O94829 963 aaKnown RBP13.57□□□□□ -0.24
SMG1-213ENST00000567737 F13A1P00488 732 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 KLK3P07288 261 aaPredicted RBP13.57□□□□□ -0.24
SMG1-213ENST00000567737 ACP5P13686 325 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 UBE2IP63279 158 aaKnown RBP13.57□□□□□ -0.24
SMG1-213ENST00000567737 ACY1Q03154 408 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 LLGL1Q15334 1064 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 ZNF630Q2M218 657 aaPredicted RBP13.57□□□□□ -0.24
SMG1-213ENST00000567737 IRGCQ6NXR0 463 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 Q6ZS92 163 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 TMEM26Q6ZUK4 368 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 ARCQ7LC44 396 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 TRIM48Q8IWZ4 208 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 MSANTD4Q8NCY6 345 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 ITLN2Q8WWU7 325 aaPredicted RBP13.57□□□□□ -0.24
SMG1-213ENST00000567737 ZDHHC12Q96GR4 267 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 CATSPERBQ9H7T0 1116 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 CD84Q9UIB8 345 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 TCFL5Q9UL49 500 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMG1-213ENST00000567737 SLC30A1Q9Y6M5 507 aa13.57□□□□□ -0.24
SMG1-213ENST00000567737 SPG11Q96JI7 2443 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 TACC2O95359 2948 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 FAM170AA1A519 330 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 WASH4PA8MWX3 477 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 PSMA7O14818 248 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 PRAMEF11O60813 436 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 SCRG1O75711 98 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 FAM155BO75949 473 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 SOD1P00441 154 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 CPP00450 1065 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 VIPP01282 170 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 PYGLP06737 847 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 RAB40ALP0C0E4 278 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 DRD2P14416 443 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 FOLR1P15328 257 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 SDC4P31431 198 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 CAPZBP47756 277 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 SCNN1BP51168 640 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 MARSP56192 900 aaKnown RBP13.56□□□□□ -0.24
SMG1-213ENST00000567737 AP1S1P61966 158 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 GPS2Q13227 327 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 ATP1A4Q13733 1029 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 C15orf59Q2T9L4 293 aaPredicted RBP13.56□□□□□ -0.24
SMG1-213ENST00000567737 TUSC1Q2TAM9 212 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 ANO6Q4KMQ2 910 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 C2CD6Q53TS8 623 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 TRIM65Q6PJ69 517 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 TMEM126BQ8IUX1 230 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 PHYKPLQ8IUZ5 450 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 ZNF295-AS1Q8N0V1 137 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 UMODL1-AS1Q8N2C9 162 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms