RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 TMPRSS15P98073 1019 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 CKAP4Q07065 602 aaKnown RBP25.88■■□□□ 1.73
NME3-209ENST00000566600 CCDC38Q502W7 563 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 PCID2Q5JVF3 399 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 ARMC3Q5W041 872 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 GLRX5Q86SX6 157 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 PPIL6Q8IXY8 311 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 ZNF592Q92610 1267 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 KRT12Q99456 494 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 ZCCHC2Q9C0B9 1178 aaKnown RBP25.88■■□□□ 1.73
NME3-209ENST00000566600 CLPBQ9H078 707 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 ASB8Q9H765 288 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 CAAP1Q9H8G2 361 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 NCKIPSDQ9NZQ3 722 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 TCAF1Q9Y4C2 921 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 SLC30A1Q9Y6M5 507 aa25.88■■□□□ 1.73
NME3-209ENST00000566600 TCRBV7S3A2A0A539 114 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 TRIM38O00635 465 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 TNFSF14O43557 240 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 UGT1A9O60656 530 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 URI1O94763 535 aaPredicted RBP25.87■■□□□ 1.73
NME3-209ENST00000566600 FUCA1P04066 466 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 GIMD1P0DJR0 217 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 UGT1A6P19224 532 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 ITGALP20701 1170 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 UGT1A1P22309 533 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 UGT1A4P22310 534 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 UGT1A3P35503 534 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 UGT1A5P35504 534 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 XIAPP98170 497 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 ILF3Q12906 894 aaKnown RBP eCLIP25.87■■□□□ 1.73
NME3-209ENST00000566600 NFATC2Q13469 925 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 PEX6Q13608 980 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 KCTD19Q17RG1 926 aaPredicted RBP25.87■■□□□ 1.73
NME3-209ENST00000566600 GPR33Q49SQ1 333 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 PPM1JQ5JR12 505 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 MARK2Q7KZI7 788 aaKnown RBP25.87■■□□□ 1.73
NME3-209ENST00000566600 JAMLQ86YT9 394 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 PTCD2Q8WV60 388 aaKnown RBP25.87■■□□□ 1.73
NME3-209ENST00000566600 ULK4Q96C45 1275 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 CDKN2AIPNLQ96HQ2 116 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 CNDP2Q96KP4 475 aaKnown RBP25.87■■□□□ 1.73
NME3-209ENST00000566600 TTC25Q96NG3 672 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 OR2M4Q96R27 311 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 GSDMCQ9BYG8 508 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 TMEM168Q9H0V1 697 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 OR2AG1Q9H205 316 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 UGT1A7Q9HAW7 530 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 UGT1A10Q9HAW8 530 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 UGT1A8Q9HAW9 530 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 EVA1BQ9NVM1 165 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 ATXN10Q9UBB4 475 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 ZNHIT2Q9UHR6 403 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 TMPRSS11EQ9UL52 423 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 GPSM3Q9Y4H4 160 aa25.87■■□□□ 1.73
NME3-209ENST00000566600 MYLKQ15746 1914 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 YY2O15391 372 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 SIGLEC6O43699 453 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 NUAK1O60285 661 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 DNAJC6O75061 913 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 MC4RP32245 332 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 TUBB2AQ13885 445 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 GTF2H3Q13889 308 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 LRP8Q14114 963 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 DEFB133Q30KQ1 61 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 PYCR3Q53H96 274 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 TSTD2Q5T7W7 516 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 ANKRD22Q5VYY1 191 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 ZCCHC8Q6NZY4 707 aaKnown RBP25.86■■□□□ 1.73
NME3-209ENST00000566600 ZNF534Q76KX8 674 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 SNX20Q7Z614 316 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 TAF8Q7Z7C8 310 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 ADGRG6Q86SQ4 1221 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 FAM181AQ8N9Y4 354 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 DDHD1Q8NEL9 900 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 GPBAR1Q8TDU6 330 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 GLMNQ92990 594 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 TUBB2BQ9BVA1 445 aa25.86■■□□□ 1.73
NME3-209ENST00000566600 SUDS3Q9H7L9 328 aaPredicted RBP25.86■■□□□ 1.73
NME3-209ENST00000566600 CNOT1A5YKK6 2376 aaKnown RBP25.85■■□□□ 1.73
NME3-209ENST00000566600 PCNX2A6NKB5 2137 aa25.85■■□□□ 1.73
NME3-209ENST00000566600 AGAP14A8MT82 685 aa25.85■■□□□ 1.73
NME3-209ENST00000566600 DNALI1O14645 258 aaPredicted RBP25.85■■□□□ 1.73
NME3-209ENST00000566600 WHAMMP3Q1A5X7 153 aa25.85■■□□□ 1.73
NME3-209ENST00000566600 GPRC6AQ5T6X5 926 aa25.85■■□□□ 1.73
NME3-209ENST00000566600 ZNF572Q7Z3I7 529 aaPredicted RBP25.85■■□□□ 1.73
NME3-209ENST00000566600 MAATS1Q7Z4T9 603 aa25.85■■□□□ 1.73
NME3-209ENST00000566600 HOOK3Q86VS8 718 aa25.85■■□□□ 1.73
NME3-209ENST00000566600 NAT8LQ8N9F0 302 aa25.85■■□□□ 1.73
NME3-209ENST00000566600 ARFGAP3Q9NP61 516 aa25.85■■□□□ 1.73
NME3-209ENST00000566600 CRLS1Q9UJA2 301 aa25.85■■□□□ 1.73
NME3-209ENST00000566600 GIPC1O14908 333 aa25.84■■□□□ 1.73
NME3-209ENST00000566600 TTI1O43156 1089 aa25.84■■□□□ 1.73
NME3-209ENST00000566600 GRID2O43424 1007 aa25.84■■□□□ 1.73
NME3-209ENST00000566600 TMEM63AO94886 807 aa25.84■■□□□ 1.73
NME3-209ENST00000566600 CDK14O94921 469 aa25.84■■□□□ 1.73
NME3-209ENST00000566600 CELA2BP08218 269 aaPredicted RBP25.84■■□□□ 1.73
NME3-209ENST00000566600 ZNF8P17098 575 aaPredicted RBP25.84■■□□□ 1.73
NME3-209ENST00000566600 KCNA4P22459 653 aa25.84■■□□□ 1.73
NME3-209ENST00000566600 SIM1P81133 766 aaPredicted RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms