RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 PCSK7Q16549 785 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 TAZQ16635 292 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 TEX44Q53QW1 395 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 ALS2CLQ60I27 953 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 TMC3Q7Z5M5 1100 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 VASH2Q86V25 355 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 CNGA4Q8IV77 575 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 SPATA16Q9BXB7 569 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 B3GNT4Q9C0J1 378 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 CARD9Q9H257 536 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 RMI1Q9H9A7 625 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 GLOD4Q9HC38 313 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 MAGEE1Q9HCI5 957 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 ATXN10Q9UBB4 475 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 SAE1Q9UBE0 346 aaPredicted RBP18.13■□□□□ 0.49
USB1-213ENST00000566292 ZNF711Q9Y462 761 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 ADGRG1Q9Y653 693 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 AKR1B15C9JRZ8 316 aaPredicted RBP18.12■□□□□ 0.49
USB1-213ENST00000566292 NUAK1O60285 661 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 SLC4A1P02730 911 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 ZNF8P17098 575 aaPredicted RBP18.12■□□□□ 0.49
USB1-213ENST00000566292 PTPN3P26045 913 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 CD82P27701 267 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 DCDC1P59894 354 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 HHEXQ03014 270 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 PRKD1Q15139 912 aaPredicted RBP18.12■□□□□ 0.49
USB1-213ENST00000566292 LLGL1Q15334 1064 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 TMEM71Q6P5X7 295 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 IYDQ6PHW0 289 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 SLC38A3Q99624 504 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 DPYSL5Q9BPU6 564 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 OR2AG1Q9H205 316 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 GOLPH3Q9H4A6 298 aa18.12■□□□□ 0.49
USB1-213ENST00000566292 SARS2Q9NP81 518 aaKnown RBP18.12■□□□□ 0.49
USB1-213ENST00000566292 NFKBIL1Q9UBC1 381 aaPredicted RBP18.12■□□□□ 0.49
USB1-213ENST00000566292 A0A0A6YYK5 440 aaPredicted RBP18.11■□□□□ 0.49
USB1-213ENST00000566292 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.11■□□□□ 0.49
USB1-213ENST00000566292 GRID2O43424 1007 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 SPOPO43791 374 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 SNX2O60749 519 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 PECAM1P16284 738 aaPredicted RBP18.11■□□□□ 0.49
USB1-213ENST00000566292 WT1P19544 449 aaPredicted RBP18.11■□□□□ 0.49
USB1-213ENST00000566292 CD68P34810 354 aaPredicted RBP18.11■□□□□ 0.49
USB1-213ENST00000566292 ADCY2Q08462 1091 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 NFATC2Q13469 925 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 ODF2Q5BJF6 829 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 ZNF569Q5MCW4 686 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 MANEAQ5SRI9 462 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 TMEM164Q5U3C3 297 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 ZNF605Q86T29 641 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 AGBL5Q8NDL9 886 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 TEKT5Q96M29 485 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 TAAR9Q96RI9 348 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 HERPUD2Q9BSE4 406 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 ZSCAN5AQ9BUG6 496 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 OCIAD1Q9NX40 245 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 UBP1Q9NZI7 540 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 PDP2Q9P2J9 529 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 PCDHGA3Q9Y5H0 932 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 SPO11Q9Y5K1 396 aa18.11■□□□□ 0.49
USB1-213ENST00000566292 ZNF106Q9H2Y7 1883 aaKnown RBP18.1■□□□□ 0.49
USB1-213ENST00000566292 AURKAO14965 403 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 PSTPIP1O43586 416 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 DUX1O43812 170 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 PMPCBO75439 489 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 SLC25A14O95258 325 aaPredicted RBP18.1■□□□□ 0.49
USB1-213ENST00000566292 NDST3O95803 873 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 F3P13726 295 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 PLA2G2AP14555 144 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 BPIP17213 487 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 CSTF2P33240 577 aaKnown RBP eCLIP18.1■□□□□ 0.49
USB1-213ENST00000566292 NR2C2P49116 596 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 HADHBP55084 474 aaKnown RBP18.1■□□□□ 0.49
USB1-213ENST00000566292 WASHC5Q12768 1159 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 SPOCD1Q6ZMY3 1216 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 ADGRG6Q86SQ4 1221 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 TRAM1L1Q8N609 369 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 TC2NQ8N9U0 490 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 OR10G6Q8NH81 332 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 ART4Q93070 314 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 GLYATL1Q969I3 302 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 SGF29Q96ES7 293 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 AHCYL2Q96HN2 611 aaKnown RBP18.1■□□□□ 0.49
USB1-213ENST00000566292 GPR63Q9BZJ6 419 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 TRIM39Q9HCM9 518 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 PCDHB11Q9Y5F2 797 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 B3GALT1Q9Y5Z6 326 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 ALG6Q9Y672 507 aa18.1■□□□□ 0.49
USB1-213ENST00000566292 CHUKO15111 745 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 CST8O60676 142 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 MAGEA1P43355 309 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 CLCNKAP51800 687 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 TFDP2Q14188 446 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 NOMO1Q15155 1222 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 LINC00303Q3SY05 128 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 KAZNQ674X7 775 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 CRTC3Q6UUV7 619 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 SLC9B2Q86UD5 537 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 TFB1MQ8WVM0 346 aaKnown RBP18.09■□□□□ 0.49
USB1-213ENST00000566292 JPH3Q8WXH2 748 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms