RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 BIRC2Q13490 618 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 CAMK2BQ13554 666 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 PEX6Q13608 980 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 ATP13A5Q4VNC0 1218 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 CERCAMQ5T4B2 595 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 CDCP2Q5VXM1 449 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 OGFOD3Q6PK18 319 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 CHST15Q7LFX5 561 aaPredicted RBP17.49■□□□□ 0.39
MSLN-206ENST00000566269 MDM1Q8TC05 714 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 RTP4Q96DX8 246 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 KCNF1Q9H3M0 494 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 CCDC86Q9H6F5 360 aaKnown RBP17.49■□□□□ 0.39
MSLN-206ENST00000566269 LRRC40Q9H9A6 602 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 RMI1Q9H9A7 625 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 IL26Q9NPH9 171 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 RABGEF1Q9UJ41 708 aa17.49■□□□□ 0.39
MSLN-206ENST00000566269 CASC3O15234 703 aaKnown RBP17.48■□□□□ 0.39
MSLN-206ENST00000566269 GPR39O43194 453 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 ZSCAN12O43309 604 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 GRID2O43424 1007 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 NUAK1O60285 661 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 PPFIA2O75334 1257 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 CSO75390 466 aaKnown RBP17.48■□□□□ 0.39
MSLN-206ENST00000566269 MTX2O75431 263 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 ZNF8P17098 575 aaPredicted RBP17.48■□□□□ 0.39
MSLN-206ENST00000566269 LPOP22079 712 aaPredicted RBP17.48■□□□□ 0.39
MSLN-206ENST00000566269 STIP1P31948 543 aaKnown RBP17.48■□□□□ 0.39
MSLN-206ENST00000566269 ACTN2P35609 894 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 SPIDRQ14159 915 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 HLTFQ14527 1009 aaKnown RBP eCLIP17.48■□□□□ 0.39
MSLN-206ENST00000566269 PTPRCAPQ14761 206 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 TAF1AQ15573 450 aaPredicted RBP17.48■□□□□ 0.39
MSLN-206ENST00000566269 PLA2G4EQ3MJ16 856 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 CRTC3Q6UUV7 619 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 RBM44Q6ZP01 1051 aaKnown RBP17.48■□□□□ 0.39
MSLN-206ENST00000566269 CCDC89Q8N998 374 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 Q8N9G6 341 aaPredicted RBP17.48■□□□□ 0.39
MSLN-206ENST00000566269 OR4K2Q8NGD2 314 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 MAIP1Q8WWC4 291 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 PATE1Q8WXA2 126 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 NXPE2Q96DL1 559 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 VPS35Q96QK1 796 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 TRIM39Q9HCM9 518 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.48■□□□□ 0.39
MSLN-206ENST00000566269 KCNK6Q9Y257 313 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 PCDHB1Q9Y5F3 818 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 RNF215Q9Y6U7 377 aa17.48■□□□□ 0.39
MSLN-206ENST00000566269 CELSR3Q9NYQ7 3312 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 ECEL1O95672 775 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 CRTAMO95727 393 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 AP2A1O95782 977 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 RPLP0P05388 317 aaKnown RBP17.47■□□□□ 0.39
MSLN-206ENST00000566269 GLB1P16278 677 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 SIX1Q15475 284 aaPredicted RBP17.47■□□□□ 0.39
MSLN-206ENST00000566269 CHRNA6Q15825 494 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 LONRF2Q1L5Z9 754 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 KCTD11Q693B1 232 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 DENND5AQ6IQ26 1287 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 ADGRG6Q86SQ4 1221 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 KLHDC8BQ8IXV7 354 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 CACTIN-AS1Q8N1I8 211 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 KDF1Q8NAX2 398 aaPredicted RBP17.47■□□□□ 0.39
MSLN-206ENST00000566269 WDR48Q8TAF3 677 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 PIH1D1Q9NWS0 290 aaKnown RBP17.47■□□□□ 0.39
MSLN-206ENST00000566269 LRIT1Q9P2V4 623 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 FEZ2Q9UHY8 353 aaPredicted RBP17.47■□□□□ 0.39
MSLN-206ENST00000566269 ZMIZ1Q9ULJ6 1067 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 KCTD3Q9Y597 815 aa17.47■□□□□ 0.39
MSLN-206ENST00000566269 LAMA5O15230 3695 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 ZNF106Q9H2Y7 1883 aaKnown RBP17.46■□□□□ 0.39
MSLN-206ENST00000566269 KMT2BQ9UMN6 2715 aaPredicted RBP17.46■□□□□ 0.39
MSLN-206ENST00000566269 RHPN2P1A8MT19 583 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 GPR89AB7ZAQ6 455 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 PSMD3O43242 534 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 NUDT21O43809 227 aaKnown RBP17.46■□□□□ 0.39
MSLN-206ENST00000566269 UGT1A9O60656 530 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 TCEA3O75764 348 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 PRAMEF1O95521 474 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 GPR89BP0CG08 455 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 UGT1A6P19224 532 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 UGT1A1P22309 533 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 UGT1A4P22310 534 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 UGT1A3P35503 534 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 UGT1A5P35504 534 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 LMAN1P49257 510 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 CCL7P80098 99 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 TMPRSS15P98073 1019 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 PDE1BQ01064 536 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 CYP4F3Q08477 520 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 ITGA9Q13797 1035 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 GTF2H3Q13889 308 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 SEPT6Q14141 434 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 INSCQ1MX18 579 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 KHDC1Q4VXA5 237 aaKnown RBP17.46■□□□□ 0.39
MSLN-206ENST00000566269 PRUNE1Q86TP1 453 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 CCNJLQ8IV13 435 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 NAGSQ8N159 534 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 BRSK1Q8TDC3 778 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 TTC25Q96NG3 672 aa17.46■□□□□ 0.39
MSLN-206ENST00000566269 GFM1Q96RP9 751 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms