RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 GOLGA8CPA6NN73 597 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 FADS2P1A8MWK0 482 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 K7ESM1 405 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 SRP72O76094 671 aaKnown RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 USP1O94782 785 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 WNT1P04628 370 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 GNSP15586 552 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 CD38P28907 300 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 HPDP32754 393 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 IGFALSP35858 605 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 ELK3P41970 407 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 ARCN1P48444 511 aaKnown RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 ARSDP51689 593 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 AFF3P51826 1226 aaKnown RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 CLDN2P57739 230 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 ACTN3Q08043 901 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 FRG1Q14331 258 aaKnown RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 CHRNA6Q15825 494 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 BBS9Q3SYG4 887 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 KYAT3Q6YP21 454 aaKnown RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 PRR23BQ6ZRT6 265 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 Q6ZSR6 202 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 CYS1Q717R9 158 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 CENPUQ71F23 418 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 DCP2Q8IU60 420 aaKnown RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 RGL4Q8IZJ4 473 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 CEP76Q8TAP6 659 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 BTN2A2Q8WVV5 523 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 STAMBPL1Q96FJ0 436 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 KLHDC7BQ96G42 594 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 COX14Q96I36 57 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 CABS1Q96KC9 395 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 TBATAQ96M53 351 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 SLC6A18Q96N87 628 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 WDR83Q9BRX9 315 aaKnown RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 APOOQ9BUR5 198 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 SUDS3Q9H7L9 328 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 PLAC1Q9HBJ0 212 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 FZD3Q9NPG1 666 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 SUSD2Q9UGT4 822 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 FKBPLQ9UIM3 349 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 TMPRSS11EQ9UL52 423 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 CA5BQ9Y2D0 317 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 WDR87Q6ZQQ6 2873 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 CACNA1EQ15878 2313 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 TRBV5-4A0A0C4DH59 114 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 CCDC162PA2VCL2 907 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 H0Y8X5 98 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 TLR4O00206 839 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 RIPK2O43353 540 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 TTC4O95801 387 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 RETP07949 1114 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 ABHD2P08910 425 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 PGAM1P18669 254 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 ARNTP27540 789 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 CA5AP35218 305 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 GPR1P46091 355 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 RABIFP47224 123 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 PDIA2Q13087 525 aaKnown RBP12.52□□□□□ -0.41
SF3B3-206ENST00000565990 SEPT6Q14141 434 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 DUOXA1Q1HG43 343 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 GPR33Q49SQ1 333 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 ATP13A5Q4VNC0 1218 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 ICE2Q659A1 982 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 STEAP4Q687X5 459 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 SLC23A3Q6PIS1 610 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 ARMCX6Q7L4S7 300 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 SNX20Q7Z614 316 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 RABEPKQ7Z6M1 372 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 PACS2Q86VP3 889 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 SNX19Q92543 992 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 PIGKQ92643 395 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 HDAC10Q969S8 669 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 FUBP1Q96AE4 644 aaKnown RBP12.52□□□□□ -0.41
SF3B3-206ENST00000565990 HIC2Q96JB3 615 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 SEC16BQ96JE7 1060 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 TRIM56Q9BRZ2 755 aaKnown RBP12.52□□□□□ -0.41
SF3B3-206ENST00000565990 LGR4Q9BXB1 951 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 SAMD15Q9P1V8 674 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 HCN4Q9Y3Q4 1203 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
SF3B3-206ENST00000565990 LAMA1P25391 3075 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 ADAMTS9Q9P2N4 1935 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 SPTY2D1-AS1A0A0U1RR47 76 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 CCL22O00626 93 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 RASGRF2O14827 1237 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 UGT1A9O60656 530 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 BANF1O75531 89 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 POLBP06746 335 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 UGT1A6P19224 532 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 DRD4P21917 467 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 UGT1A1P22309 533 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 UGT1A4P22310 534 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 MC4RP32245 332 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 UGT1A3P35503 534 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 UGT1A5P35504 534 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 MAGEA4P43358 317 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 CSNK1EP49674 416 aaKnown RBP12.51□□□□□ -0.41
SF3B3-206ENST00000565990 TMPRSS15P98073 1019 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms