RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ADGRG6Q86SQ4 1221 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 TBC1D10CQ8IV04 446 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 FAM114A1Q8IWE2 563 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 GMCL1P1Q8NEA9 526 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 ADAMTS18Q8TE60 1221 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 SEPT8Q92599 483 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 RTP3Q9BQQ7 232 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 RIOX1Q9H6W3 641 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 RXFP3Q9NSD7 469 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 RNF14Q9UBS8 474 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 MYO6Q9UM54 1294 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 GRIN2DO15399 1336 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 LAD1O00515 517 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 KRT86O43790 486 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 RANBP6O60518 1105 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 SEC31AO94979 1220 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 IPO7O95373 1038 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 PKMP14618 531 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 TNFRSF8P28908 595 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 LONP1P36776 959 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 TNNT3P45378 269 aaPredicted RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 PCP4P48539 62 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 LMAN1P49257 510 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 HAND2P61296 217 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 RPP30P78346 268 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 ORC2Q13416 577 aaPredicted RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 CASP8Q14790 479 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 TCEAL5Q5H9L2 206 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 ZNF658Q5TYW1 1059 aaPredicted RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 PAPD7Q5XG87 772 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 GALNT17Q6IS24 598 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 CYB5R4Q7L1T6 521 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 CHST3Q7LGC8 479 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 TRAPPC11Q7Z392 1133 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 TRIM74Q86UV6 250 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 TRIM73Q86UV7 250 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 C1orf131Q8NDD1 294 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 SETD9Q8NE22 299 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 OR6J1Q8NGC5 347 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 ESR2Q92731 530 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 CCDC47Q96A33 483 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 THAP9Q9H5L6 903 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 MCM9Q9NXL9 1143 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 SLC17A6Q9P2U8 582 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 RRP15Q9Y3B9 282 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 ABCB11O95342 1321 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 C3orf70A6NLC5 250 aaPredicted RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 B4E171 279 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 GOLGA8KD6RF30 607 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 SHOX2O60902 331 aaPredicted RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 WNT1P04628 370 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 CALML3P27482 149 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 HOXD9P28356 352 aaPredicted RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 TSPAN7P41732 249 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 TBCEQ15813 527 aaPredicted RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 EPC2Q52LR7 807 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 RAD9BQ6WBX8 426 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 OR8K1Q8NGG5 319 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 WIPF2Q8TF74 440 aaPredicted RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 NTN5Q8WTR8 489 aaPredicted RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 SCFD2Q8WU76 684 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 PAGE5Q96GU1 130 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 HIC2Q96JB3 615 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 NECTIN4Q96NY8 510 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 MRPL44Q9H9J2 332 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 SH3GLB2Q9NR46 395 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 ASTN1O14525 1302 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 UMODL1Q5DID0 1318 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 ZNF532Q9HCE3 1301 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 A0A087WUV0 522 aaPredicted RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 A0A087WWV3 80 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 BICDL2A1A5D9 508 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 PABPN1LA6NDY0 278 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 POC1B-GALNT4F8VUJ3 575 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 GYPCP04921 128 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 EEF2P13639 858 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 HOXB8P17481 243 aaPredicted RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 BEX3Q00994 111 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 MEA1Q16626 185 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 PTGISQ16647 500 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 SBK1Q52WX2 424 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 GLE1Q53GS7 698 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 DNAJC21Q5F1R6 531 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 LIPMQ5VYY2 423 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 ALS2CLQ60I27 953 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 DENND2CQ68D51 928 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 ANO7Q6IWH7 933 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 ACAD10Q6JQN1 1059 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 SLC2A7Q6PXP3 512 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 ADSSL1Q8N142 457 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 SLC35F6Q8N357 371 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 EIF1ADQ8N9N8 165 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 SRFBP1Q8NEF9 429 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 PPHLN1Q8NEY8 458 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 NEK11Q8NG66 645 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 SECISBP2LQ93073 1101 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 SDCCAG3Q96C92 435 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms